Gene detail

Gene detail information of Glyur001094s00031549

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G40230.1	1.00E-118	HXXXD-type acyl-transferase family protein
NR	XP_004500505.1	0	PREDICTED: taxadien-5-alpha-ol O-acetyltransferase-like [Cicer arietinum]
Swissprot	tr\|Q94CD1\|HHT1_ARATH	3.00E-58	Omega-hydroxypalmitate O-feruloyl transferase
trEMBL	tr\|G7JBV7\|G7JBV7_MEDTR	0	HXXXD-type acyl-transferase family protein {ECO:0000313\|EMBL:AES71197.1}

Sequence

Transcript Sequence

>Glyur001094s00031549.1
ATGGGAAGTTCAGTGCGTGTGAAAGAAGCTGTGGTAGTGACCCCTTCGGAGCCCACACCAAGTGGTGTCCTGTTACTCTCCGCACTCGATTCCCAACTCTTCCTTCGCTTCACCGTCGAGTACCTCCTCGTGTACAGGCCCGCCCCGGGCCTGCACGACCAGGTGGCAACCACGGCTCGCTTGAAAGCAGCATTAGCCAAAGCTTTGGTTCCTTATTACCCATTGGCAGGGAGGGTCAGGCCCAGGCCCGATGGTGCAGGCCCGGGCCTCGAGGTTTTGTGCAAAGCCCAGGGTGCGGTTTTCATCGAAGCCTCTACGGATTGCTACACCGTTAACGACTTCGAAAGAGCACCACCCAAAACGGTTACTCAATGGAGGAAGCTCTTGTCGTTTTACGTCCCCGACGTTCTCAACGGATCGCCGCCGCTTGTAATTCAGCTTACGTGGCTCGCCGACGGNGCNGCAGCGCTCGGCGTCGGAGTCAACCACTGCATAATGGACGGNATCGGAAGCGCCNATTTTCTCAACCATCTTGCGGAATTGGCTTCAGGGAAACGCGGTGGTGGTCCTAAACCGAAGCCCGTTTGGGATCGCCACCTTCTCAACCCACNGCCGGCGAGGATTTGGTTTGACCCGGCGATGACTCACCCCGAGTTCAACCGGGTCCCGGATCTCTGCGGGTTCATGAATAAGGTCACGAGCTGTCTCAAGCCGACTTGCATTGTGTTCGACCGGCGGCGACTNGGCGAGCTAAAGGGTTTGGCGCGGCGAACGAGTCAACCAGGCGAGTCGTCGAATTACACGTCGTTCGAGGTGCTCGCGGCGCACGTGTGGAGGAGCTGGGCAAGGGCAATGGGGTTCCCTCCGAACCAGACGCTGAAGCTGCTGTTCAGTGTTAACATTCGGAGCCGGGTCAAGGCGGGTCTACCCGACGGGTATTACGGGAACGCGTTTGTTCTGGGTTGTGCGCAGAGCAGTGCGAGGGAGCTTGGGGAGAGAGGTGCCGGGTACGGGTCGGGTCTTGTGAAGAGGGCGAAGGAGAGGGTGGATAGTGAGCACGTGAGGAGGGTGACTGAGTTAGTGTCCGAGTCGAGAGCGTGTCCTGACTCGGTGGGAGTGTTGATATTGTCGCAGTGGTCAAGGTTGGGTCTTGAGAGGGTCGAGCTTGGAATGGAGAAGCCGGTGTTTGTGGGGCCCATTTGCTGCGATAGGTACTGTTTGTTCTTGCCGGTGAAGGGTGAAAGGGACAGCGTCAAGGTCGCGGTGGCTGTTCCCGCCACCGCCGTTGACAATTACCACCGTTACCTCAGGGAATCGCATTTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01094	20068	21393	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001094s00031549.1	PF02458.10	Transferase	4	428	3.70E-72

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.215
SRR1783600	control	1.262
SRR1783602	moderate drought stress	0.900
SRR1811619	moderate drought stress	0.818

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.134
DRR006520	Root Summer glycyrrhizin high producing strain	6.926
DRR006521	Root Winter glycyrrhizin high producing strain	0.415
DRR006522	Root Winter glycyrrhizin high producing strain	0.411
DRR006523	Root Summer glycyrrhizin low producing strain	3.108
DRR006524	Root Summer glycyrrhizin low producing strain	3.237
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.479
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.386

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.435
SRR2868004	Drought Stress (root)	4.453
SRR2967015	Control (root)	6.348

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.778
SRR9715740	Leaf	1.321
SRR9715741	Leaf	0.335
SRR9715739	Root	9.686
SRR9715742	Root	5.578
SRR9715743	Root	6.101

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.109
SRR8749028	MeJA induced 9h	0.997
SRR8749029	MeJA induced 9h	1.078
SRR8749030	Uninduced	0.372
SRR8749031	Uninduced	0.087
SRR8749032	Uninduced	0.361

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.467
SRR8400027	Control - Root	12.807