Gene detail information of Glyur001093s00031278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02130.1 | 3.00E-66 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | KEH22935.1 | 7.14E-174 | TPR protein [Medicago truncatula] |
| trEMBL | tr|A0A072UAU5|A0A072UAU5_MEDTR | 3.00E-174 | TPR protein {ECO:0000313|EMBL:KEH22935.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01093 | 12633 | 16719 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.203 |
| SRR1783600 | control | 39.454 |
| SRR1783602 | moderate drought stress | 40.296 |
| SRR1811619 | moderate drought stress | 40.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.233 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.263 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.617 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.936 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.695 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.599 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.145 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.574 |
| SRR2868004 | Drought Stress (root) | 32.143 |
| SRR2967015 | Control (root) | 30.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.383 |
| SRR9715740 | Leaf | 21.250 |
| SRR9715741 | Leaf | 20.894 |
| SRR9715739 | Root | 9.462 |
| SRR9715742 | Root | 30.419 |
| SRR9715743 | Root | 32.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.116 |
| SRR8749028 | MeJA induced 9h | 22.385 |
| SRR8749029 | MeJA induced 9h | 18.654 |
| SRR8749030 | Uninduced | 7.783 |
| SRR8749031 | Uninduced | 3.466 |
| SRR8749032 | Uninduced | 4.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.955 |
| SRR8400027 | Control - Root | 56.656 |