Gene detail information of Glyur001093s00031277 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37710.1 | 3.00E-19 | receptor lectin kinase |
| NR | XP_003529112.1 | 1.03E-38 | PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Glycine max] |
| Swissprot | tr|O80939|LRK41_ARATH | 2.00E-25 | L-type lectin-domain containing receptor kinase IV.1 (Precursor) |
| trEMBL | tr|I1KK20|I1KK20_SOYBN | 4.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G16260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01093 | 9769 | 11889 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001093s00031277.1 | PF00139.14 | Lectin_legB | 22 | 74 | 9.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.841 |
| SRR1783600 | control | 0.908 |
| SRR1783602 | moderate drought stress | 0.104 |
| SRR1811619 | moderate drought stress | 0.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.297 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.295 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.102 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.303 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.261 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.357 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.715 |
| SRR2868004 | Drought Stress (root) | 22.653 |
| SRR2967015 | Control (root) | 18.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.924 |
| SRR9715740 | Leaf | 24.847 |
| SRR9715741 | Leaf | 34.956 |
| SRR9715739 | Root | 5.910 |
| SRR9715742 | Root | 7.533 |
| SRR9715743 | Root | 6.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.065 |
| SRR8749028 | MeJA induced 9h | 2.344 |
| SRR8749029 | MeJA induced 9h | 1.261 |
| SRR8749030 | Uninduced | 2.249 |
| SRR8749031 | Uninduced | 0.754 |
| SRR8749032 | Uninduced | 1.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.373 |
| SRR8400027 | Control - Root | 8.067 |