Gene detail

Gene detail information of Glyur001092s00028392

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47840.1	5.00E-102	adenosine monophosphate kinase
NR	XP_004506372.1	5.54E-155	PREDICTED: probable adenylate kinase 2, chloroplastic-like [Cicer arietinum]
COG	YP_003270821.1	2.00E-50	adenylate kinase [Haliangium ochraceum DSM 14365]
Swissprot	tr\|Q9FIJ7\|KAD2_ARATH	3.00E-127	Adenylate kinase 2, chloroplastic (Precursor)
trEMBL	tr\|G7JRB1\|G7JRB1_MEDTR	1.00E-143	Uncharacterized protein {ECO:0000313\|EMBL:AFK34743.1}

Sequence

Transcript Sequence

>Glyur001092s00028392.1
CAAAAGAAATGTACTTTTGGGGGTTCCCCATGGCTTATGCAATTACGATGACATGGGTAGGTGGTAGTGTTGGTATTGGTACTTGGTAGGTAGTTAGAGTTATAAAAAGGGATAACAAATGGATATATATATATATATATATATATGACTATGTAACGACTGCACTTACAGTAGAGGCATTGAGCGAGCGAGCGTGAGTGGGGAAACATAACAAATGGGTTGCACCACCATGAATTTGTCCACCGCAACCGCGTGGATTGGGAATACGGAGAGTAGGAATAAGGCGCGTGGACNTTGTTCAGTTTCAGTTTCGGTTTCCGTTACGCGGCGTCCGCAACTCCCTTTCGCTTGTTCCTCTTCTAACGCCTTTCCTCTCCGATCCCATTCCCATTCTCATTCTCGTTCTCGTTCTCATTCTACGATTGTTAAGGCGGAGGCGCAGACGGAGCCGCTCCGTGTTATGATTTCCGGTGCTCCNGCTTCCGGTAAAGGAACCCAATGCGAGCTTATCACCCGCAAATACGGTTTGGTGCATGTTGCTGCTGGAGATTTGCTTAGGGCAGAAATTGNGACGGGAAGTGAAAATGGAAAGCGGGCAAAAGAATATATGGAGAAGGGACAGTTGGTCCCTGATGAAATAGTTGTCATGATGGTCAAGGAGCGTCTCTTGAAGCCGGANTCTATAGAGAATGGTTGGCTTTTGGATGGATATCCCAGGAGCTTATCTCAGGCTACAGCACTTAAGAAATTTGGGTTTGAGCCTGATATTTTTATTCTTCTAGAGGTCTCTGAAGATATTCTTGTGGAGAGAGTAGTTGGACGGAGATTAGATCCTGTTACTGGGAAGATATATCACTTGAAGTATTCTCCTCCAGAGACAAAAGAAATTGCAGAAAGGCTTACCCAACGTTTTGATGATACTGAAGAGAAGGTAAAGTTGCGATTGAACACCCATCATCAAAATGTGGAGGCAGTCCTTTCCATGTTTAAAGATATAACCGTTAAGATTAATGGAAATGTCTCTAAGGAGGAAGTATTTGCTCAAATTGATGATGCACTCACAGTTCTTCTAGAGCAAAGGAAATCTGCTCCAGGATCTGTGGCAGCACAGAAGAGCATTGTTTGACATTTTGATCTTAGCATGGTGCCTTGCTTGAGATTGCAGAGGACATGTCAAAGTAAATTCCGCCTAATATATTACTAGTTCATTTTAGTGAGGAAATGGTTATCTTCAAAATTGTTTTGTATGCAATGATGACAAGCTTGTAAATGGAGGATTTAGTGGATCATCGTTTGGTNGTTCCTCCTGTTACTGCTTGGTTGGTATGTTGTGTTCTTTACCATTTTCTGTATATTATTTATCAATGATTGAAAATTATGTATTTGATTTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01092	53706	57679	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00939	adk, AK	EC:2.7.4.3	Purine metabolism	map00230
			Thiamine metabolism	map00730

Gene Ontology

biological_process
GO:0006139 nucleobase-containing compound metabolic process

molecular_function

GO:0004017 adenylate kinase activity

GO:0005524 ATP binding

GO:0016776 phosphotransferase activity, phosphate group as acceptor

GO:0019205 nucleobase-containing compound kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001092s00028392.1	PF00406.17	ADK	84	260	3.10E-49
Glyur001092s00028392.1	PF05191.9	ADK_lid	203	234	4.00E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.164
SRR1783600	control	11.378
SRR1783602	moderate drought stress	8.294
SRR1811619	moderate drought stress	8.380

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.478
DRR006520	Root Summer glycyrrhizin high producing strain	8.548
DRR006521	Root Winter glycyrrhizin high producing strain	8.480
DRR006522	Root Winter glycyrrhizin high producing strain	8.223
DRR006523	Root Summer glycyrrhizin low producing strain	18.167
DRR006524	Root Summer glycyrrhizin low producing strain	17.503
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.154
DRR006526	Leaf Summer glycyrrhizin high producing strain	19.126

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.554
SRR2868004	Drought Stress (root)	24.271
SRR2967015	Control (root)	22.859

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	31.314
SRR9715740	Leaf	31.490
SRR9715741	Leaf	26.941
SRR9715739	Root	8.183
SRR9715742	Root	9.690
SRR9715743	Root	11.550

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	18.015
SRR8749028	MeJA induced 9h	20.366
SRR8749029	MeJA induced 9h	14.928
SRR8749030	Uninduced	35.233
SRR8749031	Uninduced	17.163
SRR8749032	Uninduced	12.012

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.939
SRR8400027	Control - Root	28.628