Gene detail information of Glyur001091s00033713 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09350.1 | 9.00E-58 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004506395.1 | 1.80E-109 | PREDICTED: uncharacterized protein LOC101493556 [Cicer arietinum] |
| COG | YP_007094695.1 | 2.00E-08 | heat shock protein DnaJ domain-containing protein [Chroococcidiopsis thermalis PCC 7203] |
| trEMBL | tr|I3S344|I3S344_MEDTR | 1.00E-98 | Uncharacterized protein {ECO:0000313|EMBL:AFK34686.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01091 | 22610 | 24128 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001091s00033713.1 | PF00226.26 | DnaJ | 113 | 157 | 4.80E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.285 |
| SRR1783600 | control | 0.261 |
| SRR1783602 | moderate drought stress | 0.538 |
| SRR1811619 | moderate drought stress | 0.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.852 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.675 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.483 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.532 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.110 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.375 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 76.049 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 75.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.204 |
| SRR2868004 | Drought Stress (root) | 4.600 |
| SRR2967015 | Control (root) | 4.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 46.880 |
| SRR9715740 | Leaf | 66.394 |
| SRR9715741 | Leaf | 56.344 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.128 |
| SRR9715743 | Root | 0.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.753 |
| SRR8749028 | MeJA induced 9h | 0.885 |
| SRR8749029 | MeJA induced 9h | 0.799 |
| SRR8749030 | Uninduced | 1.318 |
| SRR8749031 | Uninduced | 1.029 |
| SRR8749032 | Uninduced | 1.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.151 |
| SRR8400027 | Control - Root | 1.404 |