Gene detail

Gene detail information of Glyur001090s00029972.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G11680.1	0	CYTOCHROME P450 51G1
NR	XP_004510119.1	0	PREDICTED: sterol 14-demethylase-like [Cicer arietinum]
COG	YP_004916062.1	3.00E-108	Lanosterol 14-alpha demethylase [Methylomicrobium alcaliphilum 20Z]
Swissprot	tr\|Q9SAA9\|CP511_ARATH	0	Sterol 14-demethylase
trEMBL	tr\|V7ALW0\|V7ALW0_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW06499.1}

Sequence

Transcript Sequence

>Glyur001090s00029972.1
GTTTTATTAGCAAAAACCCTGATTCTGATCCTATGAGCCCAGCTAAGCCAAACCCACCCTATAAATCTGCAAATAATCCGTAACAAAATTTAGAGACTCCATAGTGGCCACAACCACTACTGTCCAAGGACTCATGGATTGCACATTCATAGATCTGTGACACAATTAGATCTGTGCTGTGCTGTGCTGTGTGGTGTGTGGTTCCACAAACACAGTCATTGGAGTTGTCAACAACAANTACAATTGTGTCATATCATAAACATTCACACACACAAACACATCAACCATGGATGTTGTTGATGGCAACAAGTTCCTCAACACTGTTCTCCTCCTTGTGGCCACAACAGTTGTGGCAAAACTCATCTCAGCTTTCATAATCCCCAAATCGAGGAAACGCCTNCCCCCAGTTATGAAGGGGTGGCCCATAATTGGAGGGCTACCCCGTTTCCTCAAAGGTCCAATCTTTATGCTCCGTGAGGAGTACCCTAAGCTGGGTGGTGTCTTCACCCTGAAACTGTTCCACAAGAACATCACCTTTTTGATTGGCCCTGAGGTCTCTGCACACTTCTTCAAGGCCCCAGAATCTGATCTCAGCCAGCAAGAGGTGTACCAGTTCAATGTTCCNACTTTTGGCCCTGGTGTTGTCTTCGATGTTGACTACTCTGTGAGGCAGGAGCAGTTCCGCTTCTTCACTGAGGCTCTCAGGGTCAATAAACTCAAGGGTTATGTCAATCAGATGGTTGCTGAAGCTGAGGACTATTTCTCAAAGTGGGGATCGAGCGGCGAGGTTGATTTGAAGTATGAGCTTGAGCATCTGATCATCTTGACAGCCAGTAGATGCCTGTTGGGGCGTGAGGTCCGTGACAAGCTGTTCGATGATGTCTCTGCATTGTTCCATGACCTCGACAATGGGATGCTTCCAATCAGTGTTCTCTTCCCATACCTGCCAATCCCAGCTCACAGGCGCCGTGACCAAGCACGCAAGAAGCTCGCTGAAATCTTTGCAAGCATCATAGCCTCTCGAAAAAGCGCCAGCAATTCAGAGGATGACATGCTGCAGTGCTTCATTGACTCGAAATACAAAGACGGTCGCCCCACAACAGAAGCCGAAGTCACCGGACTCCTCATTGCTGCCCTTTTCGCGGGGCAGCANACCAGTTCGATCACCTCCACTTGGACCGGAGCATATCTCCTGTGTAACAACCAGTACCTTTCTGCTGTGGTGGAGGAGCAGAAGAAGTTGATGGAGAAGCACGGGGAGAAGGTCGATCACGATGTTTTGGCCGAGATGGATGTCTTGTATCGGTGCATCAAAGAAGCCTTGAGACTCCACCCTCCGTTGATCATGCTGCTGCGAAGCTCACACAGTGATTTCAGTGTCAAAACCAGAGAGGGGAAAGAGTATGACATTCCCAAGGGTCATATAGTTGCTACATCCCCTGCATTTGCAAACAGGTTACCTCACATTTTCAAGGACCCTGATAGGTATGATCCCGATAGGTTTGCCGTGGGGAGGGAAGAAGACAAGGCGGCAGGGGCATTCTCGTACATTTCCTTTGGAGGGGGAAGACATGGATGCCTTGGGGAGCCCTTTGCATATCTGCAGATAAAAGCAATATGGTCTCATTTGCTGAGGAACTTTGAACTGGAGCTGCTGTCTCCNTTCCCTGAAATTGATTGGAATGCCATGGTTGTGGGAGTCAAAGGAAAAGTGATGGTCCGATACAAGCGCCGGGAGCTTTCTGTTAATCAATAAGAAGGACCAAATGTTCNAGTCTTTTGCTTGGATTTCTTCTTTAAGTACTTCTTGTTAGTCTTGCCGTCCACTGTTTACTTGACCATGGATATCTAGAATCTTGATTTTGACTTCTTTTTCTTTCTTTCTTTTGTAATTGTGTTAAGTGATTTTAACTTTTCGCCTTTTGTGTATATCAGATGATAAGTCTGATNGAAGTAGTTACTTGGGTTCAAGTGAAATGGTTAGAGTAAGATGCTGCTTGGGATATTTTGGGGATGTATCATCCTGAAACACACTGTCCTTTTACTCTGATCATAATAAATTTGGCCAAACTGGATCCATTTAACTTCAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01090	56022	59059	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP51G1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K05917	CYP51	EC:1.14.13.70	Steroid biosynthesis	map00100

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0004497 monooxygenase activity

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001090s00029972.1	PF00067.17	p450	39	458	1.10E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	144.046
SRR1783600	control	144.330
SRR1783602	moderate drought stress	135.743
SRR1811619	moderate drought stress	135.294

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	108.789
DRR006520	Root Summer glycyrrhizin high producing strain	107.661
DRR006521	Root Winter glycyrrhizin high producing strain	532.295
DRR006522	Root Winter glycyrrhizin high producing strain	517.049
DRR006523	Root Summer glycyrrhizin low producing strain	141.610
DRR006524	Root Summer glycyrrhizin low producing strain	141.845
DRR006525	Leaf Summer glycyrrhizin high producing strain	72.375
DRR006526	Leaf Summer glycyrrhizin high producing strain	72.032

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	167.844
SRR2868004	Drought Stress (root)	128.281
SRR2967015	Control (root)	149.830

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	106.752
SRR9715740	Leaf	92.937
SRR9715741	Leaf	93.684
SRR9715739	Root	187.596
SRR9715742	Root	165.439
SRR9715743	Root	170.649

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	140.337
SRR8749028	MeJA induced 9h	208.452
SRR8749029	MeJA induced 9h	135.493
SRR8749030	Uninduced	42.139
SRR8749031	Uninduced	26.092
SRR8749032	Uninduced	41.573

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	199.056
SRR8400027	Control - Root	244.520