Gene detail information of Glyur001089s00021511 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G34320.1 | 3.00E-176 | Protein of unknown function (DUF668) |
| NR | XP_004503006.1 | 0 | PREDICTED: uncharacterized protein LOC101507619 [Cicer arietinum] |
| trEMBL | tr|I1JXW3|I1JXW3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G38370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01089 | 61354 | 67742 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001089s00021511.1 | PF11961.3 | DUF3475 | 160 | 216 | 7.30E-23 |
| Glyur001089s00021511.1 | PF05003.7 | DUF668 | 374 | 451 | 3.90E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.974 |
| SRR1783600 | control | 8.178 |
| SRR1783602 | moderate drought stress | 7.044 |
| SRR1811619 | moderate drought stress | 6.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.007 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.852 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.031 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.135 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.124 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.228 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.691 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.886 |
| SRR2868004 | Drought Stress (root) | 13.353 |
| SRR2967015 | Control (root) | 14.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.874 |
| SRR9715740 | Leaf | 12.412 |
| SRR9715741 | Leaf | 12.656 |
| SRR9715739 | Root | 1.164 |
| SRR9715742 | Root | 8.113 |
| SRR9715743 | Root | 6.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.247 |
| SRR8749028 | MeJA induced 9h | 43.221 |
| SRR8749029 | MeJA induced 9h | 21.101 |
| SRR8749030 | Uninduced | 12.399 |
| SRR8749031 | Uninduced | 11.829 |
| SRR8749032 | Uninduced | 11.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.258 |
| SRR8400027 | Control - Root | 15.116 |