Gene detail information of Glyur001087s00023147 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14240.1 | 1.00E-42 | Thioredoxin superfamily protein |
| NR | XP_004487782.1 | 9.90E-73 | PREDICTED: phosducin-like protein 3-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7IMU2|G7IMU2_MEDTR | 2.00E-71 | Phosducin-like protein {ECO:0000313|EMBL:AES65037.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01087 | 8364 | 10189 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.055 |
| SRR1783600 | control | 28.606 |
| SRR1783602 | moderate drought stress | 24.863 |
| SRR1811619 | moderate drought stress | 25.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.814 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.872 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.279 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.344 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.932 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.340 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.671 |
| SRR2868004 | Drought Stress (root) | 17.123 |
| SRR2967015 | Control (root) | 17.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.982 |
| SRR9715740 | Leaf | 3.716 |
| SRR9715741 | Leaf | 4.553 |
| SRR9715739 | Root | 8.388 |
| SRR9715742 | Root | 6.932 |
| SRR9715743 | Root | 9.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.798 |
| SRR8749028 | MeJA induced 9h | 3.219 |
| SRR8749029 | MeJA induced 9h | 0.993 |
| SRR8749030 | Uninduced | 0.662 |
| SRR8749031 | Uninduced | 0.550 |
| SRR8749032 | Uninduced | 1.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.702 |
| SRR8400027 | Control - Root | 15.958 |