Gene detail information of Glyur001086s00029542 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| trEMBL | tr|I3SF78|I3SF78_MEDTR | 2.00E-06 | Uncharacterized protein {ECO:0000313|EMBL:AFK38920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01086 | 77361 | 79398 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.639 |
| SRR1783600 | control | 1.303 |
| SRR1783602 | moderate drought stress | 0.793 |
| SRR1811619 | moderate drought stress | 0.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.265 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.984 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.752 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.683 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.387 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.189 |
| SRR2868004 | Drought Stress (root) | 0.051 |
| SRR2967015 | Control (root) | 0.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.094 |
| SRR9715740 | Leaf | 3.132 |
| SRR9715741 | Leaf | 1.824 |
| SRR9715739 | Root | 0.923 |
| SRR9715742 | Root | 1.481 |
| SRR9715743 | Root | 1.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.083 |
| SRR8749028 | MeJA induced 9h | 0.180 |
| SRR8749029 | MeJA induced 9h | 0.014 |
| SRR8749030 | Uninduced | 0.004 |
| SRR8749031 | Uninduced | 0.013 |
| SRR8749032 | Uninduced | 0.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.517 |
| SRR8400027 | Control - Root | 2.464 |