Gene detail information of Glyur001086s00029540 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55490.1 | 1.00E-130 | gamete expressed protein 1 |
| NR | KEH38206.1 | 0 | gamete-like protein [Medicago truncatula] |
| Swissprot | tr|Q681K7|GEX1_ARATH | 6.00E-172 | Protein GAMETE EXPRESSED 1 (Precursor) |
| trEMBL | tr|A0A072V988|A0A072V988_MEDTR | 0 | Gamete-like protein {ECO:0000313|EMBL:KEH38206.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01086 | 55878 | 58591 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.586 |
| SRR1783600 | control | 1.522 |
| SRR1783602 | moderate drought stress | 1.581 |
| SRR1811619 | moderate drought stress | 1.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.937 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.180 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.161 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.661 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.804 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.107 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.829 |
| SRR2868004 | Drought Stress (root) | 3.564 |
| SRR2967015 | Control (root) | 0.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.904 |
| SRR9715740 | Leaf | 0.737 |
| SRR9715741 | Leaf | 0.670 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.519 |
| SRR9715743 | Root | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.751 |
| SRR8749028 | MeJA induced 9h | 1.150 |
| SRR8749029 | MeJA induced 9h | 0.258 |
| SRR8749030 | Uninduced | 0.425 |
| SRR8749031 | Uninduced | 0.274 |
| SRR8749032 | Uninduced | 0.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.139 |
| SRR8400027 | Control - Root | 3.470 |