Gene detail information of Glyur001085s00035168 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47740.2 | 2.00E-91 | PPPDE putative thiol peptidase family protein |
| NR | NP_001240886.1 | 1.66E-172 | uncharacterized protein LOC100777596 [Glycine max] |
| Swissprot | tr|Q93VG8|PPDEX_ARATH | 1.00E-68 | DeSI-like protein At4g17486 |
| trEMBL | tr|C6TA34|C6TA34_SOYBN | 6.00E-173 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G01040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01085 | 73685 | 76441 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001085s00035168.1 | PF05903.9 | Peptidase_C97 | 50 | 183 | 6.40E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.383 |
| SRR1783600 | control | 16.059 |
| SRR1783602 | moderate drought stress | 12.804 |
| SRR1811619 | moderate drought stress | 12.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.964 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.749 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.837 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.762 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.931 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.762 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.369 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.622 |
| SRR2868004 | Drought Stress (root) | 16.948 |
| SRR2967015 | Control (root) | 17.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.283 |
| SRR9715740 | Leaf | 3.364 |
| SRR9715741 | Leaf | 3.114 |
| SRR9715739 | Root | 10.630 |
| SRR9715742 | Root | 10.852 |
| SRR9715743 | Root | 8.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.072 |
| SRR8749028 | MeJA induced 9h | 2.975 |
| SRR8749029 | MeJA induced 9h | 3.754 |
| SRR8749030 | Uninduced | 1.044 |
| SRR8749031 | Uninduced | 0.126 |
| SRR8749032 | Uninduced | 0.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.830 |
| SRR8400027 | Control - Root | 37.214 |