Gene detail information of Glyur001085s00035164 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003548643.1 | 5.45E-14 | PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Glycine max] |
| trEMBL | tr|I1MKS4|I1MKS4_SOYBN | 2.00E-14 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G03650.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01085 | 48409 | 48898 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.140 |
| SRR1783600 | control | 15.949 |
| SRR1783602 | moderate drought stress | 37.259 |
| SRR1811619 | moderate drought stress | 33.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.026 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.525 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.350 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.982 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.865 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.423 |
| SRR2868004 | Drought Stress (root) | 2.541 |
| SRR2967015 | Control (root) | 2.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.293 |
| SRR9715740 | Leaf | 0.989 |
| SRR9715741 | Leaf | 1.483 |
| SRR9715739 | Root | 0.769 |
| SRR9715742 | Root | 2.454 |
| SRR9715743 | Root | 1.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.086 |
| SRR8749028 | MeJA induced 9h | 0.170 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.083 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.487 |
| SRR8400027 | Control - Root | 2.133 |