Gene detail information of Glyur001084s00033978 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_011079223.1 | 9.74E-06 | PREDICTED: growth arrest-specific protein 8-like [Sesamum indicum] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01084 | 27034 | 30440 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.960 |
| SRR1783600 | control | 6.473 |
| SRR1783602 | moderate drought stress | 18.489 |
| SRR1811619 | moderate drought stress | 18.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.533 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.417 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.504 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.660 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.449 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.175 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.230 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.117 |
| SRR2868004 | Drought Stress (root) | 3.712 |
| SRR2967015 | Control (root) | 5.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.128 |
| SRR9715740 | Leaf | 1.238 |
| SRR9715741 | Leaf | 1.400 |
| SRR9715739 | Root | 0.513 |
| SRR9715742 | Root | 3.644 |
| SRR9715743 | Root | 3.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.043 |
| SRR8749028 | MeJA induced 9h | 3.155 |
| SRR8749029 | MeJA induced 9h | 1.411 |
| SRR8749030 | Uninduced | 2.852 |
| SRR8749031 | Uninduced | 4.742 |
| SRR8749032 | Uninduced | 4.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.109 |
| SRR8400027 | Control - Root | 1.791 |