Gene detail

Gene detail information of Glyur001083s00026398

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G12700.1	5.00E-89	Eukaryotic aspartyl protease family protein
NR	XP_003532899.1	0	PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Glycine max]
Swissprot	tr\|Q9LS40\|ASPG1_ARATH	3.00E-33	Protein ASPARTIC PROTEASE IN GUARD CELL 1 (Precursor)
trEMBL	tr\|K7L738\|K7L738_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G17230.2}

Sequence

Transcript Sequence

>Glyur001083s00026398.1
ATGGAGAATATGAGGAGGAGGAGGATGCAATGGGGTGGTTCAATTCCAATTCTCATCACCCTCCTCATGATATCATCTTCCATCATTGTTGTTCATGCTGGATTCAATGACGAGGAGGATATTGATGAGGATATAATTCAGGATGCAGAGAGAATGAGCCTTGAATTGGTGCATAGGCACGATGCACGATTTTTGGATCAAGCTGAAGCAATGAAGGGGTTCACTGAAAGGGACAACCTTAGGAGGCAGAGGATGAATCAAAGCCACAACAACAGAAGGAAGGACTCAGAAATCAATTTGCAAGAACAGCAGCATCAGCAGCAATTCAAAATGCCAATGCATGCTGGAAGGGACCTTAAACTTGGAGAGTACTTTGTTCAGGTTAAGGTTGGAACACCAGGGCAGAAGTTCTGGCTTGTTGCTGACACAGGAAGTGAGTTCACATGGTTTAATTGCAAAGAGGAGAATAAATCACATAACAAATCACATAAACATAAAAAGGCTCATCATCATCATCATAGCCATGGGAACCACCACCACCATCACCACAAACACAAGGGAGGTTCAAAGACAAAGTCCAAGTCTAATCCTTGTAATGGGGTGTTTTGTCCTCACCATTCAAAATCATTCCAGGGTGTGACATGTTCATCTAAGATGTGCAAGGTTGACCTCACCCAGCTTTTCTCTCTCAATTATTGTCCTAATCCTTCTGATCCTTGCCTTTATGATATCAGTGACACTATCACAGTTGCCCTCACAAATGGAAAGGAAGGAAAATTGCATGATGTGACAATTGGATGCACAAAAACAGTGCGTAATGGAATAACCTTCAATGAGAAAACAGGTGGCATATTGGGTCTAGGCTTTGGCAAGGATTCATTTGTTGATAAAGCAAGCCTACAATATGGTGCCAAGTTCTCCTATTGCCTTGTTGACCATTTGAGCCACAAGAACGTTTCAAGTTATNTGACTTTTGGTGATTCCCCCCACAAAGTCAACGTCCTAGGTGAGATGAAAAAAACAGAACTTTTCTTAGTCCCTCCATTCTATGGTGTGAATGTGGTAGGGATCTCAATGGGGGGCCAAATGTTAAAAATCCCACCTCAGGTGTGGGATTTCAAGGCACAAGGAGGCACAATAGTTGACTCAGGCACAACCTTGACAGCACTAACCATGCCAGCATTTGAGCCAGTGCTTGATGCATTGAACAAGTCCCTATCCAAAGTCAATTGGGTTGATGGGGAAAATTTGGGGTTGGATCACTGCTTTGAAGGTGAAGGGTTTGATGAGAGTGTGGTTCCAAGGATGGTGTTCCATTTTGCTGGGGGTGTGAGGTTTGAGCCACCTGTGAAGAGCTACATCATTGATGTGGCAACCGGGGTGAAGTGCATTGGTATTATTGCAGTAAATGGGCCTGGTGCCTGTGTTATTGGCAACATTATGCAACAGAATCATCTTTGGGAATTTGACTTGACTCGGGAAACTGTTGGGTTTGCTCCTTCTGCCTGCAGCACCTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01083	77049	80176	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001083s00026398.1	PF14543.1	TAXi_N	124	327	8.30E-24
Glyur001083s00026398.1	PF14541.1	TAXi_C	349	500	3.30E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	25.024
SRR1783600	control	25.331
SRR1783602	moderate drought stress	14.646
SRR1811619	moderate drought stress	14.403

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.094
DRR006520	Root Summer glycyrrhizin high producing strain	19.840
DRR006521	Root Winter glycyrrhizin high producing strain	57.456
DRR006522	Root Winter glycyrrhizin high producing strain	55.037
DRR006523	Root Summer glycyrrhizin low producing strain	28.987
DRR006524	Root Summer glycyrrhizin low producing strain	27.907
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.448
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.414

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	87.822
SRR2868004	Drought Stress (root)	57.140
SRR2967015	Control (root)	55.158

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.281
SRR9715740	Leaf	0.408
SRR9715741	Leaf	0.411
SRR9715739	Root	6.727
SRR9715742	Root	24.130
SRR9715743	Root	20.413

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.115
SRR8749028	MeJA induced 9h	13.493
SRR8749029	MeJA induced 9h	4.803
SRR8749030	Uninduced	10.022
SRR8749031	Uninduced	5.753
SRR8749032	Uninduced	0.739

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	40.590
SRR8400027	Control - Root	57.766