Gene detail

Gene detail information of Glyur001081s00024626

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G60900.1	0	receptor-like protein kinase 1
NR	XP_006577592.1	0	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max]
COG	YP_001958461.1	2.00E-22	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q39202\|RLK1_ARATH	0	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (Precursor)
trEMBL	tr\|G7LEC1\|G7LEC1_MEDTR	0	Cysteine-rich RLK (Receptor-like kinase) protein {ECO:0000313\|EMBL:AET01345.1}

Sequence

Transcript Sequence

>Glyur001081s00024626.1
ATGGCTTCCGTTCTGCTTCCCTTTCTCTTCTGCTCACTGATTCTGCTACCCATCTGTGTTGTAGCCCAAACCAAAAGCAACATAGCCATTGGTGATTCTCTTATTGCAGAAACCAGCACCTCCCCATGGTTGGTTTCATCACCCTCTGGTGACTTTGCCTTTGGTTTTCTCCCACTTGAGGAAAGTAGTGATCTTTTCTTGCTTTCCATTTGGTATGCCAAGATTCTAGACAAGACCATAGTTTGGTATGCCAATGGAGACAGTCCTGCCCCAAAAGGGTCAAAAGTAGAACTCACTGNCACTGATGGGCTAGTGCTAACTTCTCCAAATGGTGACCAGTTATGGAGTACTGAGGGCCTCAGTGTTAGAGTTTCACGTGGTGTGCTTAATGACACTGGCAACTTTGTGCTTGAGGATGGTAACTTCAACGGTGTGTGGGANACTTTCGAGCATCCCAGTGACACCTTGTTGCCCTCTCAGGTTCTTGAAAAGGGTGGAAAGCTTTCCTCAAGACTNACGGAGACAAATTTCAGCAAGGGAAGGTTTGAGCTCCTTTTACAAAATGATGGTAACCTTGTGATGCATTCTATAAATTTACCATCTGAGTATGTTAACGAAAACTACTATGAAAGTAAAACTGTGGAATCCAATACAACAAGTCCTGGGACTCAATTGGTCTTTGATAGATCAGGGAACTTTTATGTCTTAGGAGAGAACAATGAGAAATACAACGTGTCAGGAGAAGAGAATAAAGTCTCCTCCACTCAGTTTTATCTTCGAGCAACCCTTCATTTTGATGGGGTGTTCACAGTTTACAGGCATCCAAAGAATTCAACTGGGAGTGGGGGTTGGACCACAGTGTGGTCTAAACCGGATAATATATGTAGTTATCTTGTTACTGCAGGTAGTGGCGTTTGTGGATATAATAGCTTTTGCACTTTGGGAGATGATAAGAGGCCAACATGTCAGTGCCCAAAAAAGTACTCGCTGGTTGATCCAAATGATCCATATGGTAGCTGCAAGCCAGATTTCATACAAGGATGTGCAGAAGATGAACTTAGTAAAAGAAATGACCTCCATGACTTCGAGGTTTTGATTAACACTGATTGGCCTCNTTCAGATTCTGTGCTTCTAAAGCCTTTNACTGAAGAACAATGCAGGCAGTCCTGTATGGAAGATTGCATGTGTTCTGTGGCCATTTTCAGGTTAGGCGACNATTGCTGGAAGAAGAAGATGCCACTTTCAAATGGGAGAGTTGATGCCACACTTGATGGTGCTAAGGCCTTCTTGAAAGTGAGGAAAGATAATTCCTCCCTTGTTGTTCCTCCAATCATTGTGAACAAGAATAGGGAGACTTTGGTCTTGGTTGGTTCTGTGCTTTTTGGTAGCTCTGCTGTTCTNAATCTTGTATTGATTGGAGCAATCTGCCTTAGCACTTCTTTCATTTTTCAGTACAAGAAGAAGCTTAGCAAAGTTAGCCGAAGTGACACCAGTGTTGAAACCAATTTGCGCTGCTTCACCTATGAGGAACTTGAAGAAGCTACCAACAAGTTTGACAANGAGTTGGGAAGGGGAGCTTTTGGTATTGTTTATGAAGGAGTCATCGACTTAGGTTCCAAAACTCGCTTGGCAGTGAAAAAGTTGAACAATTTTCTGTTGGATCAGGCTCATAAGGAATTCAGGAATGAATTGAATGTCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTGCTTGGTTTTTGTGAGGCTGGATCTGAACGGTTGCTTGTTTATGAGTACATGAGCAATGGCACCTTGGCAAGTCTTCTTTTCAATGGNGAGAAACCCAGTTGGAAACTGAGATTNCATATTGCAATAGGGGTAGCTAGAGGATTGCTATATTTACATGAAGAGTGCAGCACCAGGATCATCCACTGTGACATAAAGCCTCAGAACATACTCCTTGATGATTACTTCAATGCACGGATTTCCGACTTTGGATTGGCCAAGCTATTGAACATGAATCAGAGCAAAACCAACACTGGCATAAGGGGGACAAAAGGGTATGTTGCACTTGAATGGTTTAAAAACATGCCCNTCACAGCTCAGGTGGATGTCTATAGTTATGGGGTAGTGTTACTTGAGATAATTTCCTGCAGAAAAAATGTAGAGGCGGAGCAAGAAGATGAAGAGAAAGTAATCCTAACTGATTGGGCTTATGACTGCTACAAAGATGGTGCTCTGGGTGCCTTGGTTGAGGGTGATGAGGAGGCACTGGAGGACAAGGAAAACTTGGAGAAATTGGTAATGATTGCCATTTGGTGTGTTCAAGATGATCCTGGTCTTAGACCCACCATGAGAAACGTGACACAGATGCTTGAAGGTGTTGTTGAAGTGCAAGTTCCACCACACCCCTCAACAGCAGTTAATGATCCATGTCTTAGACCCACCATGAGAAGTGTGAAACAGATGCTTGAAGGTACTATTGAAGTGCAAGTTCCACCATACCCGTCACCAGTTACCATGGCTTCCTCTTTACTTCCCTTTCTCATCCATTCACTGATTCTACTGCCCATTTTTGTTGTAGCCCAAACCAAAAGCAACATAGCCATTGGTGATTCTCTTGTAGCACAAACCAACACCTCCCCCTGGTTGGTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTCTCCCACTTAAGGGAACTACTGATCTTTTTTTGCTTTCCATTTGGTATGCCAAGATTCTAGACAAGACCATAGTTTGGTATGCCAATGGGGACAGTCCTGCCCCAAAAGGGTCAAAAGTGGAGCTCACTGCCGGTGATGGGCTAGTGCTAACTGCTCCAAATGGTGAACAGTTATGGAATAGTACTAAGAGCCTCACTGTTAGAGTTTCTCGCGGTGTGCTCAATGACACCGGCAACTTTGTGCTCGAGGATGATAACTTCAACAGCGTGTGGGAGACTTTCAAGCATCCTAGAGACACCTTGTTGCCCTCTCAGGTTCTGGAAAAGGGTGGAAAGCTTTCTTCAAGACTAAGGGAGACAAATTTCAGCAGGGGAAGGTTTGAGCTCTTTTTCAAAGATGATGGTAATGTTGTGATGCAGTCTATAAATTTGCCATCTGGGTATGTTAATAATCATCTTGGAAACTACTATGAAAGTGGAACCATGAACACATCGAGTGCTGGAAAAAAACTGGTCTTTGACAGATCAGGGGACTTGTATGTCTTGGGAGAGAACAATGAGAAATACAATGTGTCAGGAGAAGAGAGTAAAGTCTCTACCACTCAGTTTTATCTTCGAGCTACTCTNAATTTTGATGGGGTGTTCACACTCTATCAGCATCCAAAGAGTTCAACTGGGAGTGGAGGTTGGACCCCAGTGTGGTCTCAACCAGATAATATCTGTACTAGTTATGCTACTGACAGAGGTAGTGGCATTTGTGGATATAACAGCTACTGCATTTTGGGAGATCATAAGAGGCCAATCTGTCTATGCCCAAAAAGGTACTCACTCGTTGATCCTAATGATCCCTATGGTAGCTGCAAACCGGATTTCATAGAAGGATGTGCTGAAGATGAACTCAGTGGCAGCAAAGATCTCTATGACTTTGAGGTTTTGATTGATATTGACTGGCCCCTTTCAGATTCTGTGCTTCAATCGCCTTTCACTGAAGAACAATGCAAGCAGTCTTGTATGGAAGATTGCATGTGTTCTGTGGCCATTTTCGGCTTAGGAGCGGACATATGCGTGAAGAAGAAGACACCACTTTCAAATGGGAGAGTTGATGCCAGACTTAATGGCACCAAGGCCTTCTTGAAAGTGAGGAAGGATAATATTTCCTCCCATGTTGTTCCTCGCGTCATTGTGAAAAAAGAGAAGAACACTTTGATTTTGGTTGGATCTGTGCTTTTAGGTAGCTCTACTTTTCTCAATCTTGTATTGATTGGAGTTATTTGCTTTAGCACCTCCTACATTTTTCAGTACAAGAAGAAGCTTAAAAGAGTTAGCAGAAGTGACACTAGTGTTGAAACCAATTTGCGTTGCTTCACTTATGAGGAGCTTGAAGAAGCTACCAACGGGTTTGATAAAGAGCTGGGAAAGGGAGCTTTTGGTGTTGTTTATGAAGGAGTCCTGAATATAGGTTCCACAACTCGTGTGGCAGTGAAAAGGCTGACCAATTTTCTCATTGAAGAGGTTCACAAGGAATTCAGGAATGAATTGAATGTCATTGGTCTCACCCATCACAAGAACTTGGTCCGTTTACTTGGATTTTGTGAGGCTGGATCTGAACGGTTGTTGGTTTATGAGNACATGAGCAATGGCACTTTGGCAAGTCTTCTTTTCAATGGGGAGAAACCNAGTTGGAAACTAAGACTACAAATTGCAATAGGGATAGCTAGAGGACTGCTATATCTACATGAAGAGTGCGGCACCAGGATCATCCACTGTGACATAAAGCCTGAAAACATACTCCTTGATGATTACTTCAATCCGCGGATTTCCGATTTTGGATTGGCCAAGCTCTTGAAGGTGAATCAGAGCAAAACCAACACTGGTGTAAGGGGAACAAAAGGGTATGTTGCACTTGAGTGGTTTAAAAACATGCCTATCACAGCACAAGTGGATGTCTATAGTTATGGGGTAGTGCTACTTGAGATAATTTCCTGCAGAAGAAATGTAGAAGCGGAGCAAGAGGATCAAGAGAAAGAAATCCTAACTGATTGGGCTTATGACTGCTACAAAGAAGGTACTCTTGATGCCTTGGTTGAGGGTGACAATGAGGCTTTAGAGGATAAGGAAAACTTGGAGAAATTGGTAATGATTGCCATTTGGTGTGTTCAAGATGATCCATGTCTTAGACCCACCATAAGAAACGTGTCACAGATGCTTGAAGGTGCTGTTGAGGTGCCGGTTCCNCCCTCCTACTCATCAATTAGTAACCAGTATTCTCTAAACTAA

Protein Sequence

>Glyur001081s00024626.1
MASVLLPFLFCSLILLPICVVAQTKSNIAIGDSLIAETSTSPWLVSSPSGDFAFGFLPLEESSDLFLLSIWYAKILDKTIVWYANGDSPAPKGSKVELTXTDGLVLTSPNGDQLWSTEGLSVRVSRGVLNDTGNFVLEDGNFNGVWXTFEHPSDTLLPSQVLEKGGKLSSRLTETNFSKGRFELLLQNDGNLVMHSINLPSEYVNENYYESKTVESNTTSPGTQLVFDRSGNFYVLGENNEKYNVSGEENKVSSTQFYLRATLHFDGVFTVYRHPKNSTGSGGWTTVWSKPDNICSYLVTAGSGVCGYNSFCTLGDDKRPTCQCPKKYSLVDPNDPYGSCKPDFIQGCAEDELSKRNDLHDFEVLINTDWPXSDSVLLKPXTEEQCRQSCMEDCMCSVAIFRLGDXCWKKKMPLSNGRVDATLDGAKAFLKVRKDNSSLVVPPIIVNKNRETLVLVGSVLFGSSAVLNLVLIGAICLSTSFIFQYKKKLSKVSRSDTSVETNLRCFTYEELEEATNKFDXELGRGAFGIVYEGVIDLGSKTRLAVKKLNNFLLDQAHKEFRNELNVIGLTHHKNLVRLLGFCEAGSERLLVYEYMSNGTLASLLFNGEKPSWKLRXHIAIGVARGLLYLHEECSTRIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSKTNTGIRGTKGYVALEWFKNMPXTAQVDVYSYGVVLLEIISCRKNVEAEQEDEEKVILTDWAYDCYKDGALGALVEGDEEALEDKENLEKLVMIAIWCVQDDPGLRPTMRNVTQMLEGVVEVQVPPHPSTAVNDPCLRPTMRSVKQMLEGTIEVQVPPYPSPVTMASSLLPFLIHSLILLPIFVVAQTKSNIAIGDSLVAQTNTSPWLVSPSGDFAFGFLPLKGTTDLFLLSIWYAKILDKTIVWYANGDSPAPKGSKVELTAGDGLVLTAPNGEQLWNSTKSLTVRVSRGVLNDTGNFVLEDDNFNSVWETFKHPRDTLLPSQVLEKGGKLSSRLRETNFSRGRFELFFKDDGNVVMQSINLPSGYVNNHLGNYYESGTMNTSSAGKKLVFDRSGDLYVLGENNEKYNVSGEESKVSTTQFYLRATLNFDGVFTLYQHPKSSTGSGGWTPVWSQPDNICTSYATDRGSGICGYNSYCILGDHKRPICLCPKRYSLVDPNDPYGSCKPDFIEGCAEDELSGSKDLYDFEVLIDIDWPLSDSVLQSPFTEEQCKQSCMEDCMCSVAIFGLGADICVKKKTPLSNGRVDARLNGTKAFLKVRKDNISSHVVPRVIVKKEKNTLILVGSVLLGSSTFLNLVLIGVICFSTSYIFQYKKKLKRVSRSDTSVETNLRCFTYEELEEATNGFDKELGKGAFGVVYEGVLNIGSTTRVAVKRLTNFLIEEVHKEFRNELNVIGLTHHKNLVRLLGFCEAGSERLLVYEXMSNGTLASLLFNGEKPSWKLRLQIAIGIARGLLYLHEECGTRIIHCDIKPENILLDDYFNPRISDFGLAKLLKVNQSKTNTGVRGTKGYVALEWFKNMPITAQVDVYSYGVVLLEIISCRRNVEAEQEDQEKEILTDWAYDCYKEGTLDALVEGDNEALEDKENLEKLVMIAIWCVQDDPCLRPTIRNVSQMLEGAVEVPVPPSYSSISNQYSLN

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01081	54666	62974	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001081s00024626.1	PF01453.19	B_lectin	78	176	2.00E-16
Glyur001081s00024626.1	PF00069.20	Pkinase	520	784	2.20E-44
Glyur001081s00024626.1	PF01453.19	B_lectin	912	1006	2.00E-17
Glyur001081s00024626.1	PF00069.20	Pkinase	1359	1624	1.30E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.756
SRR1783600	control	0.775
SRR1783602	moderate drought stress	0.578
SRR1811619	moderate drought stress	0.547

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.635
DRR006520	Root Summer glycyrrhizin high producing strain	0.619
DRR006521	Root Winter glycyrrhizin high producing strain	0.505
DRR006522	Root Winter glycyrrhizin high producing strain	0.501
DRR006523	Root Summer glycyrrhizin low producing strain	0.320
DRR006524	Root Summer glycyrrhizin low producing strain	0.332
DRR006525	Leaf Summer glycyrrhizin high producing strain	56.730
DRR006526	Leaf Summer glycyrrhizin high producing strain	55.945

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.649
SRR2868004	Drought Stress (root)	1.352
SRR2967015	Control (root)	1.120

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	66.628
SRR9715740	Leaf	87.483
SRR9715741	Leaf	80.078
SRR9715739	Root	3.687
SRR9715742	Root	4.523
SRR9715743	Root	4.373

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.406
SRR8749028	MeJA induced 9h	1.555
SRR8749029	MeJA induced 9h	0.245
SRR8749030	Uninduced	0.359
SRR8749031	Uninduced	0.012
SRR8749032	Uninduced	0.067

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.342
SRR8400027	Control - Root	2.123