Gene detail information of Glyur001081s00024620 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48480.1 | 1.00E-13 | Lactoylglutathione lyase / glyoxalase I family protein |
| NR | XP_010100818.1 | 8.48E-81 | hypothetical protein L484_015849 [Morus notabilis] |
| COG | YP_004493697.1 | 3.00E-17 | glyoxalase family protein [Amycolicicoccus subflavus DQS3-9A1] |
| Swissprot | tr|Q9LV66|Y5848_ARATH | 2.00E-27 | Uncharacterized protein At5g48480 |
| trEMBL | tr|W9RDZ4|W9RDZ4_9ROSA | 3.00E-81 | Uncharacterized protein {ECO:0000313|EMBL:EXB84516.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01081 | 21420 | 23252 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001081s00024620.1 | PF12681.2 | Glyoxalase_2 | 36 | 156 | 2.80E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.271 |
| SRR1783600 | control | 47.873 |
| SRR1783602 | moderate drought stress | 44.182 |
| SRR1811619 | moderate drought stress | 43.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 77.833 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 77.103 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.093 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 62.499 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 62.202 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.133 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 202.370 |
| SRR2868004 | Drought Stress (root) | 102.469 |
| SRR2967015 | Control (root) | 124.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.713 |
| SRR9715740 | Leaf | 8.260 |
| SRR9715741 | Leaf | 8.873 |
| SRR9715739 | Root | 165.277 |
| SRR9715742 | Root | 92.153 |
| SRR9715743 | Root | 105.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 403.797 |
| SRR8749028 | MeJA induced 9h | 139.038 |
| SRR8749029 | MeJA induced 9h | 170.842 |
| SRR8749030 | Uninduced | 22.465 |
| SRR8749031 | Uninduced | 4.916 |
| SRR8749032 | Uninduced | 39.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.503 |
| SRR8400027 | Control - Root | 46.091 |