Gene detail information of Glyur001079s00032352 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16370.1 | 2.00E-22 | acyl activating enzyme 5 |
| NR | XP_003519307.1 | 1.94E-28 | PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like [Glycine max] |
| COG | YP_421864.1 | 2.00E-13 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Magnetospirillum magneticum AMB-1] |
| Swissprot | tr|Q9FFE6|AAE5_ARATH | 2.00E-25 | Probable acyl-activating enzyme 5, peroxisomal |
| trEMBL | tr|I1JHQ7|I1JHQ7_SOYBN | 7.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G40640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01079 | 90093 | 90488 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001079s00032352.1 | PF13193.1 | AMP-binding_C | 64 | 110 | 1.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.848 |
| SRR1783600 | control | 13.565 |
| SRR1783602 | moderate drought stress | 20.666 |
| SRR1811619 | moderate drought stress | 23.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.355 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.203 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.727 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.434 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.794 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 57.180 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.923 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 76.368 |
| SRR2868004 | Drought Stress (root) | 111.253 |
| SRR2967015 | Control (root) | 101.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 83.420 |
| SRR9715740 | Leaf | 76.191 |
| SRR9715741 | Leaf | 81.077 |
| SRR9715739 | Root | 43.467 |
| SRR9715742 | Root | 56.564 |
| SRR9715743 | Root | 46.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 74.881 |
| SRR8749028 | MeJA induced 9h | 119.316 |
| SRR8749029 | MeJA induced 9h | 180.120 |
| SRR8749030 | Uninduced | 128.837 |
| SRR8749031 | Uninduced | 343.994 |
| SRR8749032 | Uninduced | 241.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.042 |
| SRR8400027 | Control - Root | 16.754 |