Gene detail information of Glyur001077s00026250 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65295.1 | 2.00E-32 | |
| NR | NP_001236622.1 | 4.67E-70 | uncharacterized protein LOC100306040 precursor [Glycine max] |
| trEMBL | tr|C6SXQ1|C6SXQ1_SOYBN | 2.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G38660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01077 | 87563 | 88559 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 75.390 |
| SRR1783600 | control | 77.245 |
| SRR1783602 | moderate drought stress | 74.517 |
| SRR1811619 | moderate drought stress | 72.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.987 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.765 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.252 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.506 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.768 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.297 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.946 |
| SRR2868004 | Drought Stress (root) | 19.947 |
| SRR2967015 | Control (root) | 24.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.072 |
| SRR9715740 | Leaf | 21.116 |
| SRR9715741 | Leaf | 22.063 |
| SRR9715739 | Root | 25.074 |
| SRR9715742 | Root | 20.231 |
| SRR9715743 | Root | 20.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 49.554 |
| SRR8749028 | MeJA induced 9h | 20.016 |
| SRR8749029 | MeJA induced 9h | 29.078 |
| SRR8749030 | Uninduced | 14.790 |
| SRR8749031 | Uninduced | 2.999 |
| SRR8749032 | Uninduced | 4.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.765 |
| SRR8400027 | Control - Root | 22.727 |