Gene detail information of Glyur001075s00028483 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19500.1 | 3.00E-133 | Tryptophan/tyrosine permease |
| NR | XP_003617181.1 | 0 | Tyrosine-specific transport protein [Medicago truncatula] |
| COG | YP_001869236.1 | 1.00E-65 | aromatic amino acid permease [Nostoc punctiforme PCC 73102] |
| trEMBL | tr|G7KCR9|G7KCR9_MEDTR | 0 | Tyrosine-specific transporter, putative {ECO:0000313|EMBL:AET00140.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01075 | 30878 | 36656 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001075s00028483.1 | PF03222.8 | Trp_Tyr_perm | 106 | 472 | 2.30E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.022 |
| SRR1783600 | control | 0.022 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.066 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.049 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.298 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.921 |
| SRR2868004 | Drought Stress (root) | 1.938 |
| SRR2967015 | Control (root) | 0.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.320 |
| SRR9715740 | Leaf | 16.366 |
| SRR9715741 | Leaf | 14.959 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.550 |
| SRR8749028 | MeJA induced 9h | 0.224 |
| SRR8749029 | MeJA induced 9h | 0.208 |
| SRR8749030 | Uninduced | 0.057 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.150 |
| SRR8400027 | Control - Root | 0.243 |