Gene detail information of Glyur001070s00024981 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76990.5 | 0 | ACT domain repeat 3 |
| NR | XP_004498366.1 | 0 | PREDICTED: uncharacterized protein LOC101494165 isoform X1 [Cicer arietinum] |
| COG | YP_001602325.1 | 8.00E-09 | PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5] |
| Swissprot | tr|O49285|ACR3_ARATH | 0 | ACT domain-containing protein ACR3 {ECO:0000305} |
| trEMBL | tr|K7LY20|K7LY20_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G09310.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01070 | 76354 | 84553 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001070s00024981.1 | PF01842.20 | ACT | 37 | 85 | 6.00E-09 |
| Glyur001070s00024981.1 | PF01842.20 | ACT | 130 | 178 | 1.70E-09 |
| Glyur001070s00024981.1 | PF01842.20 | ACT | 269 | 318 | 8.80E-05 |
| Glyur001070s00024981.1 | PF01842.20 | ACT | 347 | 411 | 1.50E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.985 |
| SRR1783600 | control | 5.958 |
| SRR1783602 | moderate drought stress | 6.381 |
| SRR1811619 | moderate drought stress | 6.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.334 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.262 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.414 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.233 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.121 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.209 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.804 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.980 |
| SRR2868004 | Drought Stress (root) | 36.649 |
| SRR2967015 | Control (root) | 14.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.476 |
| SRR9715740 | Leaf | 7.671 |
| SRR9715741 | Leaf | 7.538 |
| SRR9715739 | Root | 3.434 |
| SRR9715742 | Root | 16.635 |
| SRR9715743 | Root | 14.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.213 |
| SRR8749028 | MeJA induced 9h | 1.925 |
| SRR8749029 | MeJA induced 9h | 1.361 |
| SRR8749030 | Uninduced | 1.450 |
| SRR8749031 | Uninduced | 0.584 |
| SRR8749032 | Uninduced | 0.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.467 |
| SRR8400027 | Control - Root | 12.335 |