Gene detail information of Glyur001069s00022472 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21710.1 | 8.00E-42 | Mitochondrial transcription termination factor family protein |
| NR | XP_004507446.1 | 2.99E-105 | PREDICTED: uncharacterized protein LOC101506030 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7JG65|G7JG65_MEDTR | 2.00E-100 | Transcription termination factor family protein {ECO:0000313|EMBL:AES89105.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01069 | 56081 | 57662 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.048 |
| SRR1783600 | control | 1.757 |
| SRR1783602 | moderate drought stress | 3.964 |
| SRR1811619 | moderate drought stress | 4.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.209 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.758 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.068 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.967 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.430 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.236 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.800 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.597 |
| SRR2868004 | Drought Stress (root) | 0.926 |
| SRR2967015 | Control (root) | 2.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.290 |
| SRR9715740 | Leaf | 4.201 |
| SRR9715741 | Leaf | 2.562 |
| SRR9715739 | Root | 0.056 |
| SRR9715742 | Root | 0.545 |
| SRR9715743 | Root | 0.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.142 |
| SRR8749028 | MeJA induced 9h | 3.224 |
| SRR8749029 | MeJA induced 9h | 0.735 |
| SRR8749030 | Uninduced | 0.054 |
| SRR8749031 | Uninduced | 0.091 |
| SRR8749032 | Uninduced | 0.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.486 |
| SRR8400027 | Control - Root | 1.628 |