Gene detail information of Glyur001069s00022466 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19400.2 | 8.00E-77 | Erythronate-4-phosphate dehydrogenase family protein |
| NR | XP_004507436.1 | 0 | PREDICTED: uncharacterized protein At1g01500-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8GUH2|Y1015_ARATH | 7.00E-70 | Uncharacterized protein At1g01500 |
| trEMBL | tr|G7JG61|G7JG61_MEDTR | 0 | Erythronate-4-phosphate dehydrogenase family protein {ECO:0000313|EMBL:AES89101.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01069 | 25123 | 28530 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.485 |
| SRR1783600 | control | 24.426 |
| SRR1783602 | moderate drought stress | 30.833 |
| SRR1811619 | moderate drought stress | 31.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.894 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.972 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 120.155 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 118.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.794 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.821 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.661 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.527 |
| SRR2868004 | Drought Stress (root) | 55.052 |
| SRR2967015 | Control (root) | 89.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.449 |
| SRR9715740 | Leaf | 67.509 |
| SRR9715741 | Leaf | 73.451 |
| SRR9715739 | Root | 20.150 |
| SRR9715742 | Root | 36.901 |
| SRR9715743 | Root | 34.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.251 |
| SRR8749028 | MeJA induced 9h | 97.759 |
| SRR8749029 | MeJA induced 9h | 99.593 |
| SRR8749030 | Uninduced | 68.477 |
| SRR8749031 | Uninduced | 111.450 |
| SRR8749032 | Uninduced | 105.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.267 |
| SRR8400027 | Control - Root | 32.867 |