Gene detail information of Glyur001069s00022463 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G13690.1 | 4.00E-12 | PRLI-interacting factor, putative |
| NR | XP_003537876.1 | 0 | PREDICTED: BTB/POZ domain-containing protein At1g63850-like [Glycine max] |
| Swissprot | tr|Q9SKH2|Y2369_ARATH | 2.00E-15 | BTB/POZ domain-containing protein At2g13690 |
| trEMBL | tr|I1LJD8|I1LJD8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G12560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01069 | 13327 | 16723 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.833 |
| SRR1783600 | control | 17.044 |
| SRR1783602 | moderate drought stress | 24.673 |
| SRR1811619 | moderate drought stress | 24.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.074 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.684 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 47.724 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 46.653 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.757 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.178 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.040 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.717 |
| SRR2868004 | Drought Stress (root) | 54.138 |
| SRR2967015 | Control (root) | 80.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.793 |
| SRR9715740 | Leaf | 15.658 |
| SRR9715741 | Leaf | 14.967 |
| SRR9715739 | Root | 26.284 |
| SRR9715742 | Root | 19.608 |
| SRR9715743 | Root | 24.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.302 |
| SRR8749028 | MeJA induced 9h | 35.418 |
| SRR8749029 | MeJA induced 9h | 36.548 |
| SRR8749030 | Uninduced | 11.468 |
| SRR8749031 | Uninduced | 66.681 |
| SRR8749032 | Uninduced | 53.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.253 |
| SRR8400027 | Control - Root | 20.850 |