Gene detail information of Glyur001068s00035968 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36210.1 | 5.00E-22 | SAUR-like auxin-responsive protein family |
| NR | KHN46022.1 | 2.58E-70 | Auxin-induced protein 15A [Glycine soja] |
| Swissprot | tr|P32295|ARG7_VIGRR | 1.00E-14 | Indole-3-acetic acid-induced protein ARG7 |
| trEMBL | tr|I1L9E9|I1L9E9_SOYBN | 1.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G08630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01068 | 56276 | 56632 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001068s00035968.1 | PF02519.9 | Auxin_inducible | 28 | 102 | 3.10E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.478 |
| SRR1783600 | control | 0.582 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.912 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.576 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.584 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.286 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.237 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.535 |
| SRR2868004 | Drought Stress (root) | 2.552 |
| SRR2967015 | Control (root) | 1.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.085 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.247 |
| SRR9715739 | Root | 0.446 |
| SRR9715742 | Root | 0.078 |
| SRR9715743 | Root | 0.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.450 |
| SRR8749028 | MeJA induced 9h | 2.190 |
| SRR8749029 | MeJA induced 9h | 1.369 |
| SRR8749030 | Uninduced | 0.535 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.389 |
| SRR8400027 | Control - Root | 3.234 |