Gene detail

Gene detail information of Glyur001067s00029149.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G46570.1	0	BR-signaling kinase 2
NR	XP_007155758.1	0	hypothetical protein PHAVU_003G229100g [Phaseolus vulgaris]
COG	YP_284821.1	2.00E-11	protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprot	tr\|Q944A7\|Y4523_ARATH	0	Probable serine/threonine-protein kinase At4g35230
trEMBL	tr\|V7CC33\|V7CC33_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW27752.1}

Sequence

Transcript Sequence

>Glyur001067s00029149.1
CCCCTCTCTCTCTGTCTCTCACACCCACTTCCTTNTCCTTTTTTCCCCATTGATTCATTTACTGCTCAACTTTTGAGTTTTGGCCCTTTTCACTTCTCTCTTCTCTCTCTTCCGTGTTTCCGCCGCTGAAACAAGCAACAACAGTAGCCCCAGTGACTCAATCACTTGCAATACGGGGAACCCCAACATTTCCAGCTTAAACCATTGAAATCACTTCACATATTTTATCATCATATTCACACCCTGTAGAATCCAATCCAGTGTTATTGTGCACTTTCGACCTTCGTTTCTATGTAGACACCACATTCACATATATCATTATCATACCATAAAGCCATAGTAATCAATCATATCACAATCATAATCATAACCATCCATGGGTTGCTTACACTCCAAAACCGCTCATCTCCACTCTCCTGATGACCCTCCAACCGCCTTACCCGACTCAAAGAAGCCCGATCCAGGCAATGGTGGGGATGATGGTGATCAAGAATGTCAGGTTCCAACATTCAAAGAGTACGGTCTGAGTGAACTCCGAAGGGCCACACATGAGTTCAGCACGGATTACATTGTCTCTGAGAGTGGTGAGAAAGCTCCCAACGTGGTCTACAGAGGGAAGCTCGAGAACAACCGGTTAGTTGCTGTCAAGCGCTTCTCCAAACAGTCCTGGCCNGATGCTCAACAGTTTATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGCCAAATGACACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAACCATTACAATGGGAAATGCGTGTTAGAGTTGCATATCATGTTGCCCAGGCACTAGATCATTGTAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCGTATAGGATTCTTTTTGATGAGGATGGTGATCCCCGTTTATCAAGTTTTGGGCTCATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATTTAGCTTACACTCCGCCTGAATTTTTGCGAACAGGAAGGATAATCCCAGAGAGTGTTATCTACAGTTATGGAACTGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCATGCTCTGGACCTAATTAGAGGGAAAAATGCATTATTGTTGATGGACTCATCCCTAGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCGAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGATATTAAGTTTCTTCTGACGGCAGTTACACCCCTTCAAAAGCAGAAAGAGGTGGCATCTCATGTGTTAATGGGCCTTACTAAAACCGCAGCAGTGCTACCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTGTTCATGACATATTGTTAAAAACAGGTTATAAAGACGAAGAAGGTGCAGAAAATGAGCTTTCATTTCAAGAGTGGACACAACAAGTGCAAGACATCTTGAACACGAAAAAGTTTGGGGATATTGCATTTAGAGACAAGGATTTCAAAAATGCAATCGAGTATTATTCCAAGTTGGTGGTTATGATGTCCGTTCCATCTGCCACTGTCTTTGCAAGGAGAGCCTTCTCCTACTTGATGAATGATCAGGCAGAACTCGCATTAAGAGACGCGATGCAGGCGCAGGTATGCATACCCGATTGGCCAACTGCATTCTATCTGCAAGCTCTTGCTCTCTCGAAGCTGGGAATGGAAACTGATGCACAGGACATGCTCAATGATGGGGCTGCCTTTGAAGCTAAGAGGTCTAACAGCTGGCGNGGTTAAGATCCTAATCTGCACTTCTTTGCTCACTAAACTAGCTAGCGGATTGGCATCAGAAAAAATATATGCTTATTTTGCTATAATTTGTACTTGCTAGCTAGAATAGGGATATGTTGTAGGATATGCTAGTTTAGGGGGCCACAAGAGAAAGATTTCTGGTATAAGATGTTCTCATGGAATATTACAGTATAGATTTCCCCACACAAATGAGTCCTGTAGAATGAGTTTAGTTTTCCCCATATGAAAATAAGTTCATTTATGCCATTATGCCATGCCTTTTGGGCTTGGTGGTCATCTACTNGGTAAAAAGCATGTTTTCCCTCTCCCTCATTTCCAATCCCAGATATACACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01067	76516	81789	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.16.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14500	BSK	EC:2.7.11.1	Plant hormone signal transduction	map04075

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001067s00029149.1	PF07714.12	Pkinase_Tyr	76	311	3.10E-29

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	28.358
SRR1783600	control	28.692
SRR1783602	moderate drought stress	21.514
SRR1811619	moderate drought stress	21.347

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	21.419
DRR006520	Root Summer glycyrrhizin high producing strain	21.149
DRR006521	Root Winter glycyrrhizin high producing strain	14.816
DRR006522	Root Winter glycyrrhizin high producing strain	14.587
DRR006523	Root Summer glycyrrhizin low producing strain	24.686
DRR006524	Root Summer glycyrrhizin low producing strain	24.421
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.781
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.829

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.303
SRR2868004	Drought Stress (root)	17.347
SRR2967015	Control (root)	18.333

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.566
SRR9715740	Leaf	11.215
SRR9715741	Leaf	12.603
SRR9715739	Root	7.653
SRR9715742	Root	20.740
SRR9715743	Root	14.371

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.731
SRR8749028	MeJA induced 9h	13.156
SRR8749029	MeJA induced 9h	7.216
SRR8749030	Uninduced	9.411
SRR8749031	Uninduced	8.526
SRR8749032	Uninduced	5.567

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.974
SRR8400027	Control - Root	20.883