Gene detail information of Glyur001067s00029142 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17970.1 | 3.00E-144 | aluminum-activated, malate transporter 12 |
| NR | CBI33905.3 | 0 | unnamed protein product [Vitis vinifera] |
| Swissprot | tr|O49696|ALMTC_ARATH | 0 | Aluminum-activated malate transporter 12 |
| trEMBL | tr|K7MLU1|K7MLU1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G16520.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01067 | 26925 | 35437 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001067s00029142.1 | PF11744.3 | ALMT | 59 | 472 | 5.20E-139 |
| Glyur001067s00029142.1 | PF07534.11 | TLD | 558 | 652 | 1.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.560 |
| SRR1783600 | control | 0.610 |
| SRR1783602 | moderate drought stress | 1.182 |
| SRR1811619 | moderate drought stress | 1.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.670 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.698 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.348 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.296 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.990 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.958 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 49.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.058 |
| SRR2868004 | Drought Stress (root) | 1.669 |
| SRR2967015 | Control (root) | 3.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.825 |
| SRR9715740 | Leaf | 52.225 |
| SRR9715741 | Leaf | 29.982 |
| SRR9715739 | Root | 0.856 |
| SRR9715742 | Root | 0.947 |
| SRR9715743 | Root | 0.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.711 |
| SRR8749028 | MeJA induced 9h | 2.038 |
| SRR8749029 | MeJA induced 9h | 1.994 |
| SRR8749030 | Uninduced | 2.967 |
| SRR8749031 | Uninduced | 3.109 |
| SRR8749032 | Uninduced | 3.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.917 |
| SRR8400027 | Control - Root | 1.233 |