Gene detail information of Glyur001066s00037414 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KDP30754.1 | 4.95E-12 | hypothetical protein JCGZ_15183 [Jatropha curcas] |
| trEMBL | tr|A0A067KG16|A0A067KG16_JATCU | 2.00E-12 | Uncharacterized protein {ECO:0000313|EMBL:KDP30754.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01066 | 579 | 1255 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001066s00037414.1 | PF02496.11 | ABA_WDS | 108 | 135 | 1.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.255 |
| SRR1783600 | control | 1.874 |
| SRR1783602 | moderate drought stress | 7.981 |
| SRR1811619 | moderate drought stress | 7.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.959 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.814 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.185 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.005 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.870 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 240.544 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 215.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.602 |
| SRR2868004 | Drought Stress (root) | 34.795 |
| SRR2967015 | Control (root) | 26.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 219.636 |
| SRR9715740 | Leaf | 272.761 |
| SRR9715741 | Leaf | 75.213 |
| SRR9715739 | Root | 1.623 |
| SRR9715742 | Root | 25.906 |
| SRR9715743 | Root | 25.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.113 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.109 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.770 |
| SRR8400027 | Control - Root | 51.148 |