Gene detail information of Glyur001065s00039136 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN05465.1 | 3.30E-07 | Nucleoporin NUP188 like [Glycine soja] |
| trEMBL | tr|K7LSN6|K7LSN6_SOYBN | 1.00E-07 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02771.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01065 | 59363 | 63819 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.429 |
| SRR1783600 | control | 2.612 |
| SRR1783602 | moderate drought stress | 3.887 |
| SRR1811619 | moderate drought stress | 3.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.070 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.286 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.819 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.877 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.539 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.517 |
| SRR9715740 | Leaf | 2.611 |
| SRR9715741 | Leaf | 2.286 |
| SRR9715739 | Root | 0.114 |
| SRR9715742 | Root | 1.292 |
| SRR9715743 | Root | 1.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.328 |
| SRR8400027 | Control - Root | 4.653 |