Gene detail information of Glyur001064s00029631 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20430.1 | 4.00E-46 | |
| NR | XP_004498918.1 | 8.44E-111 | PREDICTED: uncharacterized protein LOC101513604 [Cicer arietinum] |
| trEMBL | tr|K7M5V1|K7M5V1_SOYBN | 4.00E-105 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G10633.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01064 | 62800 | 67911 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001064s00029631.1 | PF10258.4 | RNA_GG_bind | 90 | 171 | 7.50E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.518 |
| SRR1783600 | control | 9.507 |
| SRR1783602 | moderate drought stress | 7.221 |
| SRR1811619 | moderate drought stress | 7.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.186 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.853 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.998 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.634 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.657 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.923 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.226 |
| SRR2868004 | Drought Stress (root) | 14.885 |
| SRR2967015 | Control (root) | 12.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.696 |
| SRR9715740 | Leaf | 16.653 |
| SRR9715741 | Leaf | 15.197 |
| SRR9715739 | Root | 0.764 |
| SRR9715742 | Root | 5.821 |
| SRR9715743 | Root | 6.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.760 |
| SRR8749028 | MeJA induced 9h | 23.355 |
| SRR8749029 | MeJA induced 9h | 35.638 |
| SRR8749030 | Uninduced | 23.504 |
| SRR8749031 | Uninduced | 15.538 |
| SRR8749032 | Uninduced | 12.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.827 |
| SRR8400027 | Control - Root | 12.386 |