Gene detail information of Glyur001063s00030490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12380.1 | 7.00E-22 | annexin 8 |
| NR | KEH25589.1 | 2.45E-165 | annexin D8 [Medicago truncatula] |
| Swissprot | tr|Q94CK4|ANXD8_ARATH | 2.00E-24 | Annexin D8 |
| trEMBL | tr|A0A072U747|A0A072U747_MEDTR | 9.00E-166 | Annexin D8 {ECO:0000313|EMBL:KEH25589.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01063 | 85029 | 87179 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001063s00030490.1 | PF00191.15 | Annexin | 84 | 149 | 4.50E-07 |
| Glyur001063s00030490.1 | PF00191.15 | Annexin | 215 | 281 | 2.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.971 |
| SRR1783600 | control | 6.698 |
| SRR1783602 | moderate drought stress | 4.153 |
| SRR1811619 | moderate drought stress | 4.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.657 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.929 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.013 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.355 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.702 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.189 |
| SRR2868004 | Drought Stress (root) | 15.259 |
| SRR2967015 | Control (root) | 15.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.411 |
| SRR9715740 | Leaf | 0.936 |
| SRR9715741 | Leaf | 1.961 |
| SRR9715739 | Root | 0.506 |
| SRR9715742 | Root | 4.196 |
| SRR9715743 | Root | 3.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.139 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.258 |
| SRR8400027 | Control - Root | 5.857 |