Gene detail information of Glyur001061s00037040 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44930.1 | 1.00E-28 | Plant protein of unknown function (DUF247) |
| NR | AES65121.2 | 1.04E-80 | DUF247 domain protein [Medicago truncatula] |
| trEMBL | tr|G7IND8|G7IND8_MEDTR | 4.00E-81 | DUF247 domain protein {ECO:0000313|EMBL:AES65121.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01061 | 50098 | 51618 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001061s00037040.1 | PF03140.10 | DUF247 | 49 | 95 | 3.40E-09 |
| Glyur001061s00037040.1 | PF03140.10 | DUF247 | 113 | 313 | 5.30E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.506 |
| SRR1783600 | control | 7.977 |
| SRR1783602 | moderate drought stress | 5.899 |
| SRR1811619 | moderate drought stress | 6.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.012 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.593 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.704 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.062 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.078 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.271 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.198 |
| SRR2868004 | Drought Stress (root) | 0.628 |
| SRR2967015 | Control (root) | 0.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.348 |
| SRR9715740 | Leaf | 0.022 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.032 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.206 |
| SRR8749028 | MeJA induced 9h | 0.443 |
| SRR8749029 | MeJA induced 9h | 0.100 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.043 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.963 |
| SRR8400027 | Control - Root | 3.685 |