Gene detail information of Glyur001057s00032947 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37960.2 | 8.00E-70 | |
| NR | XP_003551527.1 | 0 | PREDICTED: flocculation protein FLO11-like [Glycine max] |
| trEMBL | tr|K7MTC8|K7MTC8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G41950.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01057 | 69127 | 72367 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.733 |
| SRR1783600 | control | 0.653 |
| SRR1783602 | moderate drought stress | 0.658 |
| SRR1811619 | moderate drought stress | 0.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.690 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.854 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.513 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.437 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.307 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.304 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.507 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.840 |
| SRR2868004 | Drought Stress (root) | 1.471 |
| SRR2967015 | Control (root) | 1.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.041 |
| SRR9715740 | Leaf | 0.608 |
| SRR9715741 | Leaf | 1.628 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.294 |
| SRR9715743 | Root | 0.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.818 |
| SRR8749028 | MeJA induced 9h | 9.147 |
| SRR8749029 | MeJA induced 9h | 4.149 |
| SRR8749030 | Uninduced | 2.053 |
| SRR8749031 | Uninduced | 2.726 |
| SRR8749032 | Uninduced | 2.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.938 |
| SRR8400027 | Control - Root | 0.809 |