Gene detail information of Glyur001057s00032935 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37970.1 | 3.00E-72 | SOUL heme-binding family protein |
| NR | XP_004506644.1 | 9.96E-115 | PREDICTED: heme-binding-like protein At3g10130, chloroplastic-like [Cicer arietinum] |
| COG | NP_662010.1 | 8.00E-32 | hypothetical protein CT1119 [Chlorobium tepidum TLS] |
| Swissprot | tr|Q9SR77|HBPL1_ARATH | 2.00E-26 | Heme-binding-like protein At3g10130, chloroplastic (Precursor) |
| trEMBL | tr|G7JRA5|G7JRA5_MEDTR | 2.00E-113 | SOUL heme-binding family protein {ECO:0000313|EMBL:AES87018.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01057 | 7611 | 8219 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001057s00032935.1 | PF04832.7 | SOUL | 10 | 202 | 1.20E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.804 |
| SRR1783600 | control | 1.841 |
| SRR1783602 | moderate drought stress | 4.693 |
| SRR1811619 | moderate drought stress | 4.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.090 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.395 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 260.336 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 250.386 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.335 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.383 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 73.712 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 72.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.146 |
| SRR2868004 | Drought Stress (root) | 124.622 |
| SRR2967015 | Control (root) | 99.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 70.324 |
| SRR9715740 | Leaf | 105.719 |
| SRR9715741 | Leaf | 80.522 |
| SRR9715739 | Root | 25.835 |
| SRR9715742 | Root | 44.637 |
| SRR9715743 | Root | 38.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 98.888 |
| SRR8749028 | MeJA induced 9h | 298.496 |
| SRR8749029 | MeJA induced 9h | 279.467 |
| SRR8749030 | Uninduced | 167.498 |
| SRR8749031 | Uninduced | 147.101 |
| SRR8749032 | Uninduced | 164.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.378 |
| SRR8400027 | Control - Root | 33.617 |