Gene detail information of Glyur001057s00032934 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37975.1 | 8.00E-22 | Yos1-like protein |
| NR | XP_006576185.1 | 1.08E-43 | PREDICTED: uncharacterized protein LOC100500402 isoform X1 [Glycine max] |
| trEMBL | tr|I1JLU3|I1JLU3_SOYBN | 5.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G14970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01057 | 4107 | 6732 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001057s00032934.1 | PF08571.5 | Yos1 | 3 | 77 | 1.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.746 |
| SRR1783600 | control | 3.704 |
| SRR1783602 | moderate drought stress | 3.188 |
| SRR1811619 | moderate drought stress | 3.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.493 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.991 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.507 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.319 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.964 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.790 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.504 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.033 |
| SRR2868004 | Drought Stress (root) | 31.841 |
| SRR2967015 | Control (root) | 27.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.072 |
| SRR9715740 | Leaf | 5.078 |
| SRR9715741 | Leaf | 2.770 |
| SRR9715739 | Root | 8.365 |
| SRR9715742 | Root | 8.106 |
| SRR9715743 | Root | 6.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.480 |
| SRR8749028 | MeJA induced 9h | 11.310 |
| SRR8749029 | MeJA induced 9h | 16.319 |
| SRR8749030 | Uninduced | 6.297 |
| SRR8749031 | Uninduced | 7.274 |
| SRR8749032 | Uninduced | 8.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.420 |
| SRR8400027 | Control - Root | 14.262 |