Gene detail information of Glyur001056s00029287 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21460.1 | 1.00E-08 | Ribosomal protein S24/S35, mitochondrial |
| NR | XP_004512888.1 | 7.45E-37 | PREDICTED: ribosome biogenesis protein BOP1 homolog [Cicer arietinum] |
| trEMBL | tr|K7LEL9|K7LEL9_SOYBN | 7.00E-37 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G31181.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01056 | 86345 | 87824 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.240 |
| SRR1783600 | control | 28.442 |
| SRR1783602 | moderate drought stress | 17.019 |
| SRR1811619 | moderate drought stress | 16.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.457 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.376 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.692 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.369 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.867 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.294 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.506 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.548 |
| SRR2868004 | Drought Stress (root) | 6.480 |
| SRR2967015 | Control (root) | 7.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.267 |
| SRR9715740 | Leaf | 4.180 |
| SRR9715741 | Leaf | 2.923 |
| SRR9715739 | Root | 7.663 |
| SRR9715742 | Root | 8.541 |
| SRR9715743 | Root | 9.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.143 |
| SRR8749028 | MeJA induced 9h | 5.707 |
| SRR8749029 | MeJA induced 9h | 10.318 |
| SRR8749030 | Uninduced | 3.840 |
| SRR8749031 | Uninduced | 2.364 |
| SRR8749032 | Uninduced | 3.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.270 |
| SRR8400027 | Control - Root | 17.440 |