Gene detail information of Glyur001056s00029276 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07600.1 | 4.00E-05 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_004512882.1 | 1.89E-56 | PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cicer arietinum] |
| trEMBL | tr|B7FHF1|B7FHF1_MEDTR | 2.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:AES76606.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01056 | 32937 | 36307 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.482 |
| SRR1783600 | control | 0.464 |
| SRR1783602 | moderate drought stress | 0.808 |
| SRR1811619 | moderate drought stress | 0.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.062 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.061 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.319 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.313 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 44.755 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 45.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.356 |
| SRR2868004 | Drought Stress (root) | 27.461 |
| SRR2967015 | Control (root) | 21.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.479 |
| SRR9715740 | Leaf | 15.452 |
| SRR9715741 | Leaf | 19.011 |
| SRR9715739 | Root | 0.085 |
| SRR9715742 | Root | 1.256 |
| SRR9715743 | Root | 1.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.648 |
| SRR8749028 | MeJA induced 9h | 0.342 |
| SRR8749029 | MeJA induced 9h | 0.869 |
| SRR8749030 | Uninduced | 2.054 |
| SRR8749031 | Uninduced | 0.110 |
| SRR8749032 | Uninduced | 0.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.971 |
| SRR8400027 | Control - Root | 4.840 |