Gene detail

Gene detail information of Glyur001054s00021674

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G31900.1	myosin-like protein XIF
NR	XP_004488591.1	PREDICTED: myosin-J heavy chain-like isoform X3 [Cicer arietinum]
Swissprot	tr\|F4IRU3\|MYO12_ARATH	Myosin-12
trEMBL	tr\|V7BT17\|V7BT17_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW21137.1}

Sequence

Transcript Sequence

>Glyur001054s00021674.1
AAGCATTTGGAAATGCCAAAACAGTCAAAAATAACAATTCAAGTCGGTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGTACATACCTCCTTGAAAGGTCGCGAGTTTGCCAGGTGTCTGACCCGGAGAGAAACTATCACTGCTTTTACATGCTTTGTGCAGCCCCACCAGAGGTGACCTCTCTATAAAGATCATGAAAGAAATTTAGTAACATATANTCAACTCATGAAATCTAACAGTCAAAATTTGCTTAATAGGATGTCAAAAAGTACAAGTTAGGGGACCCAAGGCAATTCCACTATCTTAATCAATCAAACTGTTATGAAGTGTCAAATGTAGATGATGCAAAAGAATACTTAGAGACCAGAAATGCAATGGATATTGTAGGCATCAACCAGGATGAGCAGGTATTGGGCCAATGCATCAGTGCATCACATTTTAATGAAGCAGTGATTTTTTTTTATCCAAACATTTGATCAAAGAATATTCCCTCCANAGGATGCTATCTTTCGTGTGGTAGCCGCAATCCTTCATCTTGGAAACATTGACTTTGTCAAAGGGAATGAAGTTGATTCTTCCAGATTGAAAGATGACAAATCACTCTTCCACCTTCGAACAGTTGCCGAGTTATTCATGTACAAGCTTTGATCCAACTGTCAAATTCATATAATTCCAATGCTTCACCTTTATTGTCTCTTGACATGTTTATGTTCAGGTGTGATGAGAAAGCACTAGAAGACTCACTTTGCCAGCGTGTCATTGTTACTCCTGATGGTAACATTACAAAGCCTCTAGACCCAGATGCAGCTGCTTTGAGCCGAGATGCTTTGGCAAAGACTGTGTACTCCAGATTGTTTGATTGGTAAAAACAAACTAACCAATGACACCAACATTGTAATCTAGGACATTGAAGTCCCAAAACCTGTGATGTCTGAGAAACATACTAGTCCTATACAACATCAATCATAATGCATAATAAATCTTCTCGGAAACCTAAAGTGTTTTGTTTCTATTGCCTATTCTATAAACATAATTTCAGTTTTGACACAAGGAGTGACATATTCTAAATGCATTCTTCTAATATGGCAGGATTGTGGACAAGATTAACAGTTCAATTGGTCAAGATTCTAATGCAGTAAGCTTAATAGGAGTCCTTGACATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTAACAAATGAGAAGTTACAACAACATTTTAATCAGGCAAGGTTATAAGTTATAACTTCTAAATACAGCTTGCGCATCATTATTGTTGCAAATTCATGATATAGAAATGCATCTGTTTCAACAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCTGGGGGAATAATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAGTCAACTCATGAGACCTTTGCACAAAAGATGTACCAGACATACAAAGGACACAAGCGTTTCAGCAAGCCAAAACTTTCTCGAACAGATTTCACAATTAACCATTATGCAGGAGATGTCACATATCAAGCAGATTATTTTCTTGATAAAAATAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATATGCTTCCAAGTGTCCATTTGTTGCTAATCTTTTCCCTCCTTTACCTGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACATTGAGCACAGCAGAACCACATTACATAAGATGTGTGAAACCAAATACAGTTTTGCAGCCAGGAATATTTGAGAACTTCAATGTCTTAAACCAGTTGAGATGCGGGGGAGTACTTGAGGCAATAAGGATTAGTTGTGCTGGATATCCAACTAAAAGAACATTTGAAGAATTTCTTGATCGCTTTGGAATGCTAGCCCCTGATATGGGGAAAACAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCTCGAAGAGCCGAAGTCTTAGCCAAAGCAGCCAGGCTCATACAGAGACAAATCCGAACACATTTAACCAGAAAAGAATTCATCACCCTGAAAAAGGCCACAATTCATATCCAGAAGATTTGGAGAGCAAAACTTGCACGTAAACTCTATGAGCATATGAGGAGGGAAGCAGCTTCTATCCGGATACAGAAACATGTGCGTGCGCACAAAGCAAGAATGTATTATACATCATCACAAGCGTCAGCTATTGTTATTCAATCAGGGTTGAGAGCATTAGCAGCAAGAAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCCACCAAAATTCAGACACAATGGAGAAGAGTTCAAGCTCTTTCTAATTACAAACAGCAGAAGAGAGCAACTGTTGCACTTCAATGTCTCTGGAGAGCTAAAGTAGCAAGGAAAGAGCTCAGAAAGCTTCGGATGGCTGCAAGGGAAACTGGGGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAACGCGTTGAGGAGCTTACATGGAGACTAGATATTGAAAAACACATGAGGATTGACCTTGAAGAAGCTAAAGGGCAAGAGATTGCTAAATTACAAAATGCTTTACAAGAAATGCAAGCCCAGCTAGATGAAGCTCATNCTGCAATTATACACGAGAAAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTAATCAAGGAAGTACCTGTTGTGGACAACACCAAGCTAGATTTACTGACAAATAAAAACGAGGAGCTGGAGAGTGAAGTAGAAGAGCTGAAAAAGAAGATTAAAGATTTTGAAGAAAGGTGCTCGGAAATTGAAAAGCAGAATCAAGCAAGGCTGAAAGAGGCAGAAGAAGCACAGCTTAAAGCAACACAACTTCAGGAGACTATTGAAAGATTAGAAGTGAGTTTGTCAAACCTTGAGTCTGAGAACCAGGTTCTATGCCAGCAGGCTTTGGTAGAATCGAAAAATGAAGAACTCCCTGAAGAGATCAAAACCCTCAAGGATCNGATAGCAAATCTAGAATCAGAGAATTCACTTCTACGGAGCCAGGCAGCAGCTGCTTCAGAGCGGAAAGTTCATCCAGAAAAAATAGAAACAGGCCAGGAAGTTGCTGTTGTAGANCAGATTCAACCGAGAGTTATTGCAGATAACATGACTGCACAAATCAAGGACTTGGATAATGGAAATCAAACAGAAGAAGAATGGCATGCAAGAAAGGAACCAAGAGCACCTGTCTCCTTCCTTACAAAACAAAGATCACTCACAGACAGGCAGCAGGAAAATCATGATGCACTGCTCAAGTGTCTCGTGGAAGATAAGCGATTTGAGAAAAACAGACCAGCAGTTTCTTGTATTGTTTATAAAGCACTTCTTCATTGGAGATCTTTTGAATCAGAGAAGACACACATATTTGACAAAGTTATCCACACTATTCGATCATCTATAGAGAGTCAAGAAGGAATCAGTGATCTAGCATATTGGCTTTCAACAACATCAACACTTTTGTTTTATCTACACTGCACACTCAAGGTCAGCAACACAACTAAGGCAGTGTCACGTAATCGAAACTCTCCTGCCACTCTATTTGGCAAAATGGCACAAGGTCTACGTTCATCTTCAATGGGCATGGGGATTTCAAGTGGGTACAGTGGAATGGTGGACAAGCCAAATGAGCAATCTAAAGTGGAAGCCAAATACCCGGCTATTCTGTTTAAGCAACACTTGACTGCATATGTGGAGAAGATATATGGAATGATCCGTGACAGTTTAAAGAAAGAGATTAGCCCATTCTTAAATCTGTGTATTCAGGCACCAAGATCCATAAGGACCAGATCAATAAGAGGGTCATCCAAAAACATCCATTCAAATATAGTTGCAAAACAACAGGCATTACATATGCACTGGAAAGGCATTGTCAGCAAGTTAGATCATGCCTTGGGTATATTGTCTGAAAACTATGTCCCTCCCATGATAACAAGGAAGATATTTAGTCAGGTTTTCTCATTCATGAATGTTCAACTCTTTAATAGTTTGTTGCTTCGTCGCGAGTGCTGCTCCTTTAGCAATGGAGAATATTTGAAGGCAGGTTTGCATGAGTTGGAACTATGGTGTCTCAAAGCAACAGATCAGTTTGCTGGGTCATCCTGGGATGAACTCAAACACATACGCCAAGCAGTGGGTTTTCTGGTTTTGCATCAAAAGACTCAAAAATCTTTGGAGGAGATCACAAATGAACTCTGCCCGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGATAAGTATGGAGCACAGGGATTATCTCCAGAGGTCATTAGCAGAATGAGAGTGCTCATGACAGAAGACTCAATAAANATACCCAATAACTCATTCCTTCTTGAGGTGGAATCCAGCATTCCTTTCCTAATGGAGGAGTTGTTTCGGTCCATGAGTGACATTCGCCTATCAGATATGGATGTGGATCCACCACCAATCCTCAGNCAAAGGTCTGATTTCCAATTCTTGTTGCAACAAATGGATAGTGACTCTCATTGAGCTAGTGGAAGTTTGGTGCTGACACATAGTTTTAGTTTCTGATTTTCATTGATTTAATTTGGGTTTGGTGTGATGTGAAGAGAGTGATTGAGTGGTGAGGTGAAGAATTGTAATTANTTTATATTATTTATTATTCTGATTTTTTCATTTGTTCTTGGGAAGATTCCAATTTTTTTTATTCTTGTAAGGCTCCTTGTCAAGGAAGGCCACAGTGAATTTTGACATTGTTGTATAATGTTACTT

Protein Sequence

>Glyur001054s00021674.1
MHLFQQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLSRTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLYASKCPFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLSTAEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDMGKTKVFLRAGQMAELDARRAEVLAKAARLIQRQIRTHLTRKEFITLKKATIHIQKIWRAKLARKLYEHMRREAASIRIQKHVRAHKARMYYTSSQASAIVIQSGLRALAARNEYRYRRRTKASTKIQTQWRRVQALSNYKQQKRATVALQCLWRAKVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRIDLEEAKGQEIAKLQNALQEMQAQLDEAHXAIIHEKEAAKIAIEQAPPVIKEVPVVDNTKLDLLTNKNEELESEVEELKKKIKDFEERCSEIEKQNQARLKEAEEAQLKATQLQETIERLEVSLSNLESENQVLCQQALVESKNEELPEEIKTLKDXIANLESENSLLRSQAAAASERKVHPEKIETGQEVAVVXQIQPRVIADNMTAQIKDLDNGNQTEEEWHARKEPRAPVSFLTKQRSLTDRQQENHDALLKCLVEDKRFEKNRPAVSCIVYKALLHWRSFESEKTHIFDKVIHTIRSSIESQEGISDLAYWLSTTSTLLFYLHCTLKVSNTTKAVSRNRNSPATLFGKMAQGLRSSSMGMGISSGYSGMVDKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSKNIHSNIVAKQQALHMHWKGIVSKLDHALGILSENYVPPMITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWDELKHIRQAVGFLVLHQKTQKSLEEITNELCPVLSIPQIYRIGTMFWDDKYGAQGLSPEVISRMRVLMTEDSIXIPNNSFLLEVESSIPFLMEELFRSMSDIRLSDMDVDPPPILXQRSDFQFLLQQMDSDSH

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01054	50570	62995	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

--

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001054s00021674.1	PF00063.16	Myosin_head	3	239	6.60E-68
Glyur001054s00021674.1	PF00612.22	IQ	254	272	0.0032
Glyur001054s00021674.1	PF00612.22	IQ	277	295	0.00047
Glyur001054s00021674.1	PF00612.22	IQ	302	320	0.0039
Glyur001054s00021674.1	PF00612.22	IQ	325	344	0.12
Glyur001054s00021674.1	PF00612.22	IQ	349	369	0.22
Glyur001054s00021674.1	PF00612.22	IQ	373	392	0.019
Glyur001054s00021674.1	PF01843.14	DIL	911	1017	2.60E-33
Glyur001054s00021674.2	PF00063.16	Myosin_head	3	239	6.60E-68
Glyur001054s00021674.2	PF00612.22	IQ	254	272	0.0032
Glyur001054s00021674.2	PF00612.22	IQ	277	295	0.00047
Glyur001054s00021674.2	PF00612.22	IQ	302	320	0.0039
Glyur001054s00021674.2	PF00612.22	IQ	325	344	0.12
Glyur001054s00021674.2	PF00612.22	IQ	349	369	0.22
Glyur001054s00021674.2	PF00612.22	IQ	373	392	0.019
Glyur001054s00021674.2	PF01843.14	DIL	911	1017	2.60E-33
Glyur001054s00021674.3	PF00063.16	Myosin_head	3	241	3.60E-68
Glyur001054s00021674.3	PF00612.22	IQ	254	272	0.0022
Glyur001054s00021674.3	PF00612.22	IQ	277	295	0.00032
Glyur001054s00021674.3	PF00612.22	IQ	302	320	0.0027
Glyur001054s00021674.3	PF00612.22	IQ	325	344	0.081
Glyur001054s00021674.3	PF00612.22	IQ	349	369	0.15
Glyur001054s00021674.3	PF00612.22	IQ	373	392	0.013
Glyur001054s00021674.4	PF02736.14	Myosin_N	21	56	2.50E-07
Glyur001054s00021674.4	PF00063.16	Myosin_head	74	474	5.20E-149
Glyur001054s00021674.5	PF02736.14	Myosin_N	21	56	2.50E-07
Glyur001054s00021674.5	PF00063.16	Myosin_head	74	485	1.10E-141
Glyur001054s00021674.6	PF01843.14	DIL	135	241	3.60E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.069
SRR1783600	control	4.956
SRR1783602	moderate drought stress	5.359
SRR1811619	moderate drought stress	5.503

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.202
DRR006520	Root Summer glycyrrhizin high producing strain	7.117
DRR006521	Root Winter glycyrrhizin high producing strain	1.319
DRR006522	Root Winter glycyrrhizin high producing strain	1.192
DRR006523	Root Summer glycyrrhizin low producing strain	4.730
DRR006524	Root Summer glycyrrhizin low producing strain	2.594
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.900
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.477

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.301
SRR2868004	Drought Stress (root)	15.957
SRR2967015	Control (root)	13.588

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.617
SRR9715740	Leaf	1.341
SRR9715741	Leaf	1.282
SRR9715739	Root	0.359
SRR9715742	Root	1.943
SRR9715743	Root	1.418

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.069
SRR8749028	MeJA induced 9h	4.624
SRR8749029	MeJA induced 9h	1.128
SRR8749030	Uninduced	2.505
SRR8749031	Uninduced	2.554
SRR8749032	Uninduced	1.234

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.842
SRR8400027	Control - Root	16.780