Gene detail information of Glyur001054s00021671 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G55360.1 | 1.00E-178 | Protein of Unknown Function (DUF239) |
| NR | XP_004488588.1 | 0 | PREDICTED: uncharacterized protein LOC101495276 [Cicer arietinum] |
| trEMBL | tr|K7L737|K7L737_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G17180.6} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01054 | 14385 | 19867 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001054s00021671.1 | PF14365.1 | DUF4409 | 75 | 199 | 6.60E-48 |
| Glyur001054s00021671.1 | PF03080.10 | DUF239 | 204 | 433 | 2.20E-94 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 167.045 |
| SRR1783600 | control | 167.722 |
| SRR1783602 | moderate drought stress | 128.758 |
| SRR1811619 | moderate drought stress | 127.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 138.748 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 137.736 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.695 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 41.946 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 196.211 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 195.885 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.304 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 81.541 |
| SRR2868004 | Drought Stress (root) | 72.899 |
| SRR2967015 | Control (root) | 73.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.238 |
| SRR9715740 | Leaf | 18.810 |
| SRR9715741 | Leaf | 14.876 |
| SRR9715739 | Root | 95.419 |
| SRR9715742 | Root | 126.399 |
| SRR9715743 | Root | 118.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.499 |
| SRR8749028 | MeJA induced 9h | 39.693 |
| SRR8749029 | MeJA induced 9h | 11.547 |
| SRR8749030 | Uninduced | 6.366 |
| SRR8749031 | Uninduced | 0.863 |
| SRR8749032 | Uninduced | 1.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 183.988 |
| SRR8400027 | Control - Root | 238.469 |