Gene detail information of Glyur001052s00025687 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45760.1 | 9.00E-08 | BON association protein 2 |
| NR | AFK36493.1 | 2.50E-74 | unknown [Medicago truncatula] |
| trEMBL | tr|I3S8A1|I3S8A1_MEDTR | 9.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:AFK36493.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01052 | 92183 | 92725 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.001 |
| SRR1783600 | control | 0.068 |
| SRR1783602 | moderate drought stress | 0.351 |
| SRR1811619 | moderate drought stress | 0.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.456 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.554 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 61.103 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 62.775 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.647 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.117 |
| SRR2868004 | Drought Stress (root) | 20.378 |
| SRR2967015 | Control (root) | 101.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 454.218 |
| SRR9715740 | Leaf | 152.262 |
| SRR9715741 | Leaf | 388.782 |
| SRR9715739 | Root | 620.695 |
| SRR9715742 | Root | 430.860 |
| SRR9715743 | Root | 471.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 90.329 |
| SRR8749028 | MeJA induced 9h | 106.547 |
| SRR8749029 | MeJA induced 9h | 147.147 |
| SRR8749030 | Uninduced | 283.731 |
| SRR8749031 | Uninduced | 108.427 |
| SRR8749032 | Uninduced | 264.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.958 |
| SRR8400027 | Control - Root | 42.579 |