Gene detail information of Glyur001048s00031772 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN21274.1 | 2.61E-69 | hypothetical protein glysoja_038585 [Glycine soja] |
| trEMBL | tr|I1N1Z4|I1N1Z4_SOYBN | 1.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G32880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01048 | 86609 | 87058 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.382 |
| SRR1783600 | control | 1.552 |
| SRR1783602 | moderate drought stress | 0.483 |
| SRR1811619 | moderate drought stress | 0.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.559 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.448 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.683 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.356 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.373 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.209 |
| SRR2868004 | Drought Stress (root) | 21.666 |
| SRR2967015 | Control (root) | 24.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.291 |
| SRR9715741 | Leaf | 0.142 |
| SRR9715739 | Root | 0.076 |
| SRR9715742 | Root | 6.689 |
| SRR9715743 | Root | 6.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.158 |
| SRR8749028 | MeJA induced 9h | 0.474 |
| SRR8749029 | MeJA induced 9h | 0.237 |
| SRR8749030 | Uninduced | 0.691 |
| SRR8749031 | Uninduced | 0.200 |
| SRR8749032 | Uninduced | 0.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.320 |
| SRR8400027 | Control - Root | 7.492 |