Gene detail information of Glyur001048s00031769 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007146250.1 | 1.43E-24 | hypothetical protein PHAVU_006G0250001g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7BJS6|V7BJS6_PHAVU | 5.00E-25 | Uncharacterized protein {ECO:0000313|EMBL:ESW18244.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01048 | 44821 | 52289 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.250 |
| SRR1783600 | control | 11.261 |
| SRR1783602 | moderate drought stress | 8.544 |
| SRR1811619 | moderate drought stress | 8.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.811 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.992 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.318 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.344 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.376 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.276 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.986 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.698 |
| SRR2868004 | Drought Stress (root) | 16.283 |
| SRR2967015 | Control (root) | 12.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.950 |
| SRR9715740 | Leaf | 16.016 |
| SRR9715741 | Leaf | 16.896 |
| SRR9715739 | Root | 4.601 |
| SRR9715742 | Root | 11.597 |
| SRR9715743 | Root | 9.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.360 |
| SRR8749028 | MeJA induced 9h | 7.091 |
| SRR8749029 | MeJA induced 9h | 10.891 |
| SRR8749030 | Uninduced | 6.377 |
| SRR8749031 | Uninduced | 8.032 |
| SRR8749032 | Uninduced | 5.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.524 |
| SRR8400027 | Control - Root | 18.004 |