Gene detail information of Glyur001043s00031415.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52525.1 | 4.00E-18 | ovate family protein 6 |
| NR | XP_006591603.1 | 9.11E-68 | PREDICTED: putative uncharacterized protein DDB_G0277255-like [Glycine max] |
| Swissprot | tr|Q3EAL1|OFP6_ARATH | 1.00E-21 | Transcription repressor OFP6 |
| trEMBL | tr|I1LKN3|I1LKN3_SOYBN | 3.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G18420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01043 | 28106 | 28711 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001043s00031415.1 | PF04844.8 | Ovate | 114 | 171 | 2.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.392 |
| SRR1783600 | control | 0.334 |
| SRR1783602 | moderate drought stress | 0.220 |
| SRR1811619 | moderate drought stress | 0.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.172 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.257 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.593 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.147 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.762 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.564 |
| SRR2868004 | Drought Stress (root) | 0.923 |
| SRR2967015 | Control (root) | 0.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.066 |
| SRR9715740 | Leaf | 0.199 |
| SRR9715741 | Leaf | 0.099 |
| SRR9715739 | Root | 0.102 |
| SRR9715742 | Root | 1.242 |
| SRR9715743 | Root | 1.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.045 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.158 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.725 |
| SRR8400027 | Control - Root | 2.126 |