Gene detail information of Glyur001043s00031413 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007014304.1 | 1.90E-09 | Uncharacterized protein TCM_039288 [Theobroma cacao] |
| trEMBL | tr|A0A061GR85|A0A061GR85_THECC | 7.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:EOY31923.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01043 | 4260 | 10180 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.072 |
| SRR1811619 | moderate drought stress | 0.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.824 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.824 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.044 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.303 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.813 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.107 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.403 |
| SRR2868004 | Drought Stress (root) | 5.064 |
| SRR2967015 | Control (root) | 6.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.879 |
| SRR9715740 | Leaf | 41.956 |
| SRR9715741 | Leaf | 75.204 |
| SRR9715739 | Root | 1.327 |
| SRR9715742 | Root | 4.343 |
| SRR9715743 | Root | 3.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.292 |
| SRR8749028 | MeJA induced 9h | 2.488 |
| SRR8749029 | MeJA induced 9h | 1.364 |
| SRR8749030 | Uninduced | 1.007 |
| SRR8749031 | Uninduced | 3.875 |
| SRR8749032 | Uninduced | 4.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.515 |
| SRR8400027 | Control - Root | 1.599 |