Gene detail information of Glyur001041s00027451 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80450.1 | 1.00E-14 | VQ motif-containing protein |
| NR | XP_007135770.1 | 5.07E-46 | hypothetical protein PHAVU_010G157300g [Phaseolus vulgaris] |
| trEMBL | tr|V7AQD9|V7AQD9_PHAVU | 2.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:ESW07764.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01041 | 36271 | 37964 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001041s00027451.1 | PF05678.9 | VQ | 25 | 54 | 2.30E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 55.746 |
| SRR1783600 | control | 57.372 |
| SRR1783602 | moderate drought stress | 71.829 |
| SRR1811619 | moderate drought stress | 71.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.305 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.360 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.580 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.616 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 49.602 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.427 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.869 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.888 |
| SRR2868004 | Drought Stress (root) | 16.325 |
| SRR2967015 | Control (root) | 16.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.232 |
| SRR9715740 | Leaf | 0.635 |
| SRR9715741 | Leaf | 1.286 |
| SRR9715739 | Root | 39.112 |
| SRR9715742 | Root | 40.345 |
| SRR9715743 | Root | 36.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.546 |
| SRR8749028 | MeJA induced 9h | 12.801 |
| SRR8749029 | MeJA induced 9h | 14.112 |
| SRR8749030 | Uninduced | 6.236 |
| SRR8749031 | Uninduced | 0.940 |
| SRR8749032 | Uninduced | 2.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.255 |
| SRR8400027 | Control - Root | 43.303 |