Gene detail information of Glyur001040s00028732 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31040.1 | 5.00E-144 | CemA-like proton extrusion protein-related |
| NR | XP_003516797.1 | 0 | PREDICTED: chloroplast envelope membrane protein-like isoform X1 [Glycine max] |
| Swissprot | tr|A6MVV9|CEMA_RHDSA | 5.00E-35 | Chloroplast envelope membrane protein |
| trEMBL | tr|K7K109|K7K109_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G00410.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01040 | 77903 | 86082 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001040s00028732.1 | PF03040.9 | CemA | 195 | 406 | 7.00E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.378 |
| SRR1783600 | control | 5.327 |
| SRR1783602 | moderate drought stress | 5.232 |
| SRR1811619 | moderate drought stress | 5.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.761 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.796 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.688 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.600 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.382 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.965 |
| SRR2868004 | Drought Stress (root) | 14.507 |
| SRR2967015 | Control (root) | 13.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.279 |
| SRR9715740 | Leaf | 31.072 |
| SRR9715741 | Leaf | 24.086 |
| SRR9715739 | Root | 1.252 |
| SRR9715742 | Root | 7.032 |
| SRR9715743 | Root | 6.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.962 |
| SRR8749028 | MeJA induced 9h | 8.126 |
| SRR8749029 | MeJA induced 9h | 5.140 |
| SRR8749030 | Uninduced | 9.326 |
| SRR8749031 | Uninduced | 6.625 |
| SRR8749032 | Uninduced | 3.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.403 |
| SRR8400027 | Control - Root | 11.031 |