Gene detail information of Glyur001040s00028729 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58110.1 | 1.00E-37 | chaperone binding;ATPase activators |
| NR | NP_001237973.1 | 5.92E-70 | uncharacterized protein LOC100499919 [Glycine max] |
| trEMBL | tr|C6SY60|C6SY60_SOYBN | 2.00E-70 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14183.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01040 | 65283 | 69363 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001040s00028729.1 | PF09229.6 | Aha1_N | 45 | 138 | 2.80E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.987 |
| SRR1783600 | control | 3.057 |
| SRR1783602 | moderate drought stress | 5.525 |
| SRR1811619 | moderate drought stress | 5.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.985 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.002 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.429 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.124 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.716 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.786 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.079 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.255 |
| SRR2868004 | Drought Stress (root) | 5.870 |
| SRR2967015 | Control (root) | 6.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.261 |
| SRR9715740 | Leaf | 9.655 |
| SRR9715741 | Leaf | 10.839 |
| SRR9715739 | Root | 2.102 |
| SRR9715742 | Root | 4.909 |
| SRR9715743 | Root | 4.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.301 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.262 |
| SRR8749030 | Uninduced | 0.379 |
| SRR8749031 | Uninduced | 0.049 |
| SRR8749032 | Uninduced | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.727 |
| SRR8400027 | Control - Root | 5.200 |