Gene detail information of Glyur001037s00036418 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43640.2 | 3.00E-43 | Signal recognition particle, SRP9/SRP14 subunit |
| NR | NP_001235838.1 | 7.19E-68 | uncharacterized protein LOC100526909 [Glycine max] |
| Swissprot | tr|O04421|SRP14_ARATH | 6.00E-59 | Signal recognition particle 14 kDa protein |
| trEMBL | tr|C6T2Q3|C6T2Q3_SOYBN | 3.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01037 | 41 | 3031 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001037s00036418.1 | PF02290.10 | SRP14 | 4 | 93 | 2.20E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.088 |
| SRR1783600 | control | 43.669 |
| SRR1783602 | moderate drought stress | 35.222 |
| SRR1811619 | moderate drought stress | 33.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.209 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 41.406 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 38.894 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 42.696 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.498 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.644 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.115 |
| SRR2868004 | Drought Stress (root) | 24.915 |
| SRR2967015 | Control (root) | 22.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.131 |
| SRR9715740 | Leaf | 15.416 |
| SRR9715741 | Leaf | 14.211 |
| SRR9715739 | Root | 4.521 |
| SRR9715742 | Root | 21.589 |
| SRR9715743 | Root | 11.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 88.297 |
| SRR8749028 | MeJA induced 9h | 49.476 |
| SRR8749029 | MeJA induced 9h | 78.549 |
| SRR8749030 | Uninduced | 34.555 |
| SRR8749031 | Uninduced | 28.095 |
| SRR8749032 | Uninduced | 25.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.412 |
| SRR8400027 | Control - Root | 40.910 |