Gene detail information of Glyur001033s00031541 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14615.1 | 4.00E-15 | |
| NR | XP_004498006.1 | 1.14E-38 | PREDICTED: uncharacterized protein LOC101504697 [Cicer arietinum] |
| trEMBL | tr|G7ZY98|G7ZY98_MEDTR | 1.00E-37 | Uncharacterized protein {ECO:0000313|EMBL:AFK41292.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01033 | 51975 | 53988 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001033s00031541.1 | PF09803.4 | DUF2346 | 10 | 73 | 3.90E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 292.765 |
| SRR1783600 | control | 293.346 |
| SRR1783602 | moderate drought stress | 318.215 |
| SRR1811619 | moderate drought stress | 316.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 191.762 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 190.326 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 339.602 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 330.539 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 203.595 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 202.846 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 119.656 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 118.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 100.803 |
| SRR2868004 | Drought Stress (root) | 92.414 |
| SRR2967015 | Control (root) | 88.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 84.136 |
| SRR9715740 | Leaf | 111.645 |
| SRR9715741 | Leaf | 75.688 |
| SRR9715739 | Root | 64.650 |
| SRR9715742 | Root | 48.341 |
| SRR9715743 | Root | 47.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.527 |
| SRR8749028 | MeJA induced 9h | 12.161 |
| SRR8749029 | MeJA induced 9h | 21.891 |
| SRR8749030 | Uninduced | 16.682 |
| SRR8749031 | Uninduced | 6.575 |
| SRR8749032 | Uninduced | 19.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 86.499 |
| SRR8400027 | Control - Root | 90.154 |