Gene detail information of Glyur001033s00031538 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14570.1 | 0 | acylaminoacyl-peptidase-related |
| NR | XP_006588524.1 | 0 | PREDICTED: acylamino-acid-releasing enzyme-like isoform X2 [Glycine max] |
| COG | YP_001737254.1 | 2.00E-36 | dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Candidatus Korarchaeum cryptofilum OPF8] |
| Swissprot | tr|Q8VZF3|CGEP_ARATH | 3.00E-11 | Probable glutamyl endopeptidase, chloroplastic (Precursor) |
| trEMBL | tr|I1L7C1|I1L7C1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G00350.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01033 | 11389 | 28857 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001033s00031538.1 | PF00326.16 | Peptidase_S9 | 601 | 817 | 4.40E-37 |
| Glyur001033s00031538.2 | PF00326.16 | Peptidase_S9 | 550 | 766 | 3.90E-37 |
| Glyur001033s00031538.3 | PF00326.16 | Peptidase_S9 | 563 | 779 | 4.10E-37 |
| Glyur001033s00031538.4 | PF13812.1 | PPR_3 | 161 | 194 | 0.0064 |
| Glyur001033s00031538.4 | PF13041.1 | PPR_2 | 198 | 238 | 2.30E-07 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 289 | 318 | 1.30E-06 |
| Glyur001033s00031538.4 | PF13041.1 | PPR_2 | 320 | 369 | 8.80E-11 |
| Glyur001033s00031538.4 | PF13041.1 | PPR_2 | 390 | 437 | 4.40E-08 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 468 | 490 | 0.31 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 498 | 526 | 0.00015 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 532 | 560 | 0.053 |
| Glyur001033s00031538.4 | PF13041.1 | PPR_2 | 568 | 611 | 2.60E-09 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 637 | 664 | 0.00081 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 672 | 701 | 0.047 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 706 | 735 | 0.0023 |
| Glyur001033s00031538.4 | PF01535.15 | PPR | 741 | 770 | 0.002 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.848 |
| SRR1783600 | control | 9.986 |
| SRR1783602 | moderate drought stress | 13.614 |
| SRR1811619 | moderate drought stress | 13.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.510 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.417 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.352 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.084 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.787 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.354 |
| SRR2868004 | Drought Stress (root) | 23.208 |
| SRR2967015 | Control (root) | 20.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.693 |
| SRR9715740 | Leaf | 18.621 |
| SRR9715741 | Leaf | 24.544 |
| SRR9715739 | Root | 3.145 |
| SRR9715742 | Root | 8.173 |
| SRR9715743 | Root | 7.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.628 |
| SRR8749028 | MeJA induced 9h | 9.099 |
| SRR8749029 | MeJA induced 9h | 11.824 |
| SRR8749030 | Uninduced | 10.695 |
| SRR8749031 | Uninduced | 8.110 |
| SRR8749032 | Uninduced | 9.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.354 |
| SRR8400027 | Control - Root | 18.641 |