Gene detail information of Glyur001032s00027432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03667.1 | 0 | Asparagine synthase family protein |
| NR | XP_003607813.1 | 0 | Asparagine synthetase domain-containing protein [Medicago truncatula] |
| COG | YP_004004181.1 | 7.00E-17 | asparagine synthase [Methanothermus fervidus DSM 2088] |
| trEMBL | tr|G7JHJ3|G7JHJ3_MEDTR | 0 | Asparagine synthase {ECO:0000313|EMBL:AES90010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01032 | 75354 | 82208 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001032s00027432.1 | PF13537.1 | GATase_7 | 107 | 226 | 1.00E-06 |
| Glyur001032s00027432.1 | PF00733.16 | Asn_synthase | 369 | 610 | 4.60E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.940 |
| SRR1783600 | control | 1.978 |
| SRR1783602 | moderate drought stress | 2.955 |
| SRR1811619 | moderate drought stress | 2.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.707 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.607 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.227 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.519 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.443 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.404 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.975 |
| SRR2868004 | Drought Stress (root) | 7.063 |
| SRR2967015 | Control (root) | 5.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.116 |
| SRR9715740 | Leaf | 3.665 |
| SRR9715741 | Leaf | 2.784 |
| SRR9715739 | Root | 0.888 |
| SRR9715742 | Root | 2.451 |
| SRR9715743 | Root | 2.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.833 |
| SRR8749028 | MeJA induced 9h | 7.115 |
| SRR8749029 | MeJA induced 9h | 7.093 |
| SRR8749030 | Uninduced | 1.859 |
| SRR8749031 | Uninduced | 1.671 |
| SRR8749032 | Uninduced | 1.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.495 |
| SRR8400027 | Control - Root | 6.662 |